| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd703_1801 |
|---|
| Symbol | |
|---|
| ID | 8090397 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dickeya dadantii Ech703 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012880 |
|---|
| Strand | + |
|---|
| Start bp | 2145441 |
|---|
| End bp | 2146445 |
|---|
| Gene Length | 1005 bp |
|---|
| Protein Length | 334 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 644835885 |
|---|
| Product | oligopeptide/dipeptide ABC transporter, ATPase subunit |
|---|
| Protein accession | YP_002987419 |
|---|
| Protein GI | 242239238 |
|---|
| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0444] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.00628177 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCGTTGC TGGAAGTCAA AAATCTGAGC GTGGTGTTTG ACGGCGCCGC CGGGCCGATA
CGGGCGGTGA ACGATCTGTC CTATACGCTG ACGGCCGGCG AGACGCTGGG GATCGTCGGC
GAGTCCGGCT CCGGTAAAAG CGTGCACGCG CTGGCGATGG TCGGGCTGCT GGCGTCGGCG
GGGCGGGTGA CGGCCGGCGA GGTCTGGTTC GACGGCCGCG ACCTGCTGCG GCTTTCGCGG
CGAGAGCGGC GCACGGTATG GGGCCGGGAG ATCGGCTTTG TGTTTCAGGA TCCGATGACC
TCGCTCAACC CGGTGCTGAC CATTGAGCGT CAAGTGACGG AGCCATTGCG GCGTCATCTG
GGATTGTCGG CGCGCGCGGC GCGGGAGCAG GCGGTCGATC TGCTGGATCA GGTGGGGATC
GTCAATCCGC GTCAGCGCTT GGGCCAGTAC CCGCACGAGT TTTCCGGCGG TATGCGCCAG
CGGGTGATGA TTGCCATCGG CATCGCCTGC CGTCCGAAGC TGCTGATCGC CGATGAAGCC
ACCACCGCGC TGGATGTCAC CGTCCAGGCG CAGATTCTGG CGCTGGTGCG CGACCTGAAA
CGGCAAATCG GCACCACCGT TATCTGGATT ACCCACGACA TGGGCGTGGT GGCCGGGCTG
GCGGATACCG TTCAGGTGAT GTACGGCGGC CGCATCATGG AGCGCGGCCC GGTGGAGGCC
ATTTTCGACG CGCCGCACAG CGCCTATACC TGGGGGCTGC TGAAATCGCT GCCGACCATT
GCCCGGCGCG GCGCCGGGCG GTTGTACCCG ATCCCCGGCA ATCCGCCGGA TCCGGCCCGC
CTGCCGCCGG GCGATCCGTT CGCGCCCCGC AATCCGTTCG CCACCGAGCG CTGCTTTCGG
GAAGTCCCGC CGCTGCGCCA GGTCGCGGGC GGCGCGCCCG GCCATCAGGT GGCGGCCTGG
TACGATTTGC CTGCGCTGCT GGCGGCGCAG GGAGGTGCGG CATGA
|
|---|
| Protein sequence | MALLEVKNLS VVFDGAAGPI RAVNDLSYTL TAGETLGIVG ESGSGKSVHA LAMVGLLASA
GRVTAGEVWF DGRDLLRLSR RERRTVWGRE IGFVFQDPMT SLNPVLTIER QVTEPLRRHL
GLSARAAREQ AVDLLDQVGI VNPRQRLGQY PHEFSGGMRQ RVMIAIGIAC RPKLLIADEA
TTALDVTVQA QILALVRDLK RQIGTTVIWI THDMGVVAGL ADTVQVMYGG RIMERGPVEA
IFDAPHSAYT WGLLKSLPTI ARRGAGRLYP IPGNPPDPAR LPPGDPFAPR NPFATERCFR
EVPPLRQVAG GAPGHQVAAW YDLPALLAAQ GGAA
|
|---|
| |