Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dd703_1772 |
Symbol | |
ID | 8090368 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dickeya dadantii Ech703 |
Kingdom | Bacteria |
Replicon accession | NC_012880 |
Strand | + |
Start bp | 2112804 |
End bp | 2114366 |
Gene Length | 1563 bp |
Protein Length | 520 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 644835856 |
Product | nitrate reductase, beta subunit |
Protein accession | YP_002987390 |
Protein GI | 242239209 |
COG category | [C] Energy production and conversion |
COG ID | [COG1140] Nitrate reductase beta subunit |
TIGRFAM ID | [TIGR01660] nitrate reductase, beta subunit |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.172958 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAAATTC GTTCGCAAGT CGGCATGGTG CTGAACCTGG ATAAATGCAT CGGCTGCCAT ACCTGTTCAG TGACCTGTAA AAACGTCTGG ACCAGCCGCG AAGGGGTGGA GTACGCCTGG TTTAATAATG TAGAAACCAA ACCCGGCACC GGCTATCCCC ATGCGTGGGA AGATCAGGAC AAATGGCAAG GCGGCTGGAT CCGTAAAATC AACGGCCGAC TGGCGCCGCG CATGGGCAAC CGTGTCGGGG TGCTGTCGAA GATTTTCGCC AACCCGGACG TCCCGGCGCT GGACGACTAC TACGAACCGT TCGACTACGA CTACGGCCAT CTGCAACGCG CCGGGGAGAG CCGGCACCAG CCGGTGGCGC GCCCACGCTC GTTAATCACC GGCCAGCGCA TGAACTCCAT CGAAAACGGC CCCAACTGGG AGGACGATCT GGGGGGCGAA TTCAGCAAGC GCTCACAGGA TAAGAACTTC GACGACATGC AGAAAGCCAT GTACGGGCAG TTCGAGCACA CCTTCATGAT GTACCTGCCG AGACTGTGTG AGCACTGCCT CAACCCGGCG TGCGTCGCGA CCTGTCCGAG TGGTGCGATT TACAAACGGG CGGAAGACGG CATTGTGCTG ATCGACCAGG ATAAATGCCG CGGTTGGCGC ATGTGCCTGA CCGGTTGCCC GTACAAAAAA ATCTACTTCA ACTGGAAGAG CGGCAAATCG GAAAAGTGCA TTTTCTGCTA CCCGCGCATC GAATCCGGCA TGCCGACGCT GTGCTCGGAA ACCTGCGTCG GGCGTATCCG CTATCTGGGG GTGCTGCTGT ACGACGCCGA CCGCATTGAA CAGGCGGCAT CGGTGGAAAG CGAAACCGAC CTGTACCGCC GCCAGCGGGA GATTTTCCTC GACCCGCACG ACCCTGAGGT GATCGCCCAG GCGCAGCGCG ACGGTATTCC GCTCAGCGTG ATTGAGGCGG CGCAACAGTC GCCGGTGTAC AAACTGGCGG TGGAGTGGCA ACTGGCGTTG CCGCTGCACC CGGAATACCG CACGCTGCCG ATGGTGTGGT ACGTGCCGCC CCTGTCGCCG ATCCAATCCG CCGCCGATGC CGGCCAGCTG GCGCACAGCG GCGTGCTGCC GGACGTGGAG AGCCTGCGCA TTCCGGTGCA GTATCTGGCC AATCTGCTGA CGGCGGGCGA TGTCGAGCCG GTACTGCTGG CGTTGCGTCG CATGCTGGCG ATGCGCCATT ACAAGCGGGC GCAGACCGTC GACCAGCTTG ACGATACGCG CGCGCTGGAG CAGGTCGGGC TGACGCCGGC ACAGGCCGAG GACATGTACC GCTATCTGGC GATCGCCAAC TATGAAGACC GCTTTGTAGT GCCCTCCAGC CACCGTGAAC TGGCGCGGGA CGCCTTCCCG GAAGCGCATG GTTGTGGTTT CAGTTTCGGC GACGGTTGTC ATGGCAGCGA TTCGTCATTC AACCTGTTCA ATAGCCGCCG TATCGACGCC ATCGACGTGA CCAGCCAGAC CCAGACCATG AGCCGCCGCC GGATGCAGGA GAACAAGTCA TGA
|
Protein sequence | MKIRSQVGMV LNLDKCIGCH TCSVTCKNVW TSREGVEYAW FNNVETKPGT GYPHAWEDQD KWQGGWIRKI NGRLAPRMGN RVGVLSKIFA NPDVPALDDY YEPFDYDYGH LQRAGESRHQ PVARPRSLIT GQRMNSIENG PNWEDDLGGE FSKRSQDKNF DDMQKAMYGQ FEHTFMMYLP RLCEHCLNPA CVATCPSGAI YKRAEDGIVL IDQDKCRGWR MCLTGCPYKK IYFNWKSGKS EKCIFCYPRI ESGMPTLCSE TCVGRIRYLG VLLYDADRIE QAASVESETD LYRRQREIFL DPHDPEVIAQ AQRDGIPLSV IEAAQQSPVY KLAVEWQLAL PLHPEYRTLP MVWYVPPLSP IQSAADAGQL AHSGVLPDVE SLRIPVQYLA NLLTAGDVEP VLLALRRMLA MRHYKRAQTV DQLDDTRALE QVGLTPAQAE DMYRYLAIAN YEDRFVVPSS HRELARDAFP EAHGCGFSFG DGCHGSDSSF NLFNSRRIDA IDVTSQTQTM SRRRMQENKS
|
| |