| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd703_1746 |
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| Symbol | |
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| ID | 8090342 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dickeya dadantii Ech703 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012880 |
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| Strand | + |
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| Start bp | 2074745 |
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| End bp | 2078632 |
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| Gene Length | 3888 bp |
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| Protein Length | 1295 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 644835830 |
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| Product | ATP-dependent RNA helicase HrpA |
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| Protein accession | YP_002987364 |
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| Protein GI | 242239183 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1643] HrpA-like helicases |
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| TIGRFAM ID | [TIGR01967] ATP-dependent helicase HrpA |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.308673 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGACATCAC CTCTCCATAC ATTACAGGCG CAACTCGATG AGCTGATGCT GCGCGATCAG
CAACGTCTGC GCCGTCGGTT GCAGGGCGCA ATGAAGGTGA ATAAACCTCA GGCGCAAGCG
GCGATTGCTC TGGAAATCGG GGAAGAAATC GCCGGTGCGC GTCAACGAGT GGAGCGACGT
CGCGCATCGT TGCCGGCCAT CAGTTATCCA GACACGCTGC CGGTCAGCCA GAAGCGAGAG
GCTATTCTGG CGGCGATACG CGACCATCAG GTGGTGATTG TCGCGGGGGA GACCGGTTCC
GGCAAAACCA CCCAATTGCC CAAAATGTGC CTGGAGCTGG GACGCGGCGT GCGCGGGCTG
ATCGGCCATA CCCAGCCGCG GCGGCTGGCG GCGCGCAGCG TGGCGAATCG TATCGCCGAG
GAGCTGGCGT GTGAACCCGG CGGCGCGGTC GGCTACAAAG TGCGTTTTAA CGATCAAGTG
GGTGACAACA CGCTGGTCAA ACTGATGACC GACGGTATCC TGCTGGCGGA AATCCAGCAG
GATCGGCTGT TGATGCAGTA CGACACCCTC ATTATCGATG AGGCGCACGA GCGTAGCCTG
AACATCGATT TTATCCTTGG TTACTTGAAG CAATTGCTGC CGCGTCGACC GGATCTGAAA
GTCATCATCA CTTCCGCAAC CATCGACCCG CAACGCTTTT CCCGGCATTT CAGCAATGCA
CCGATCGTTG AAGTTTCCGG CCGTACCTAT CCGGTGGACG TGCGCTATCG TCCGGTCGTC
GATACGGAAG ACGACAGCGA TCGCGATCAA CTGCAGGCGA TACTGGATGC GGTGGATGAG
ATCTGTCACG AAGGGCCGGG CGATATTCTG GTGTTCATGA GCGGCGAGCG GGAAATTCGC
GATACCGCCG ATGCGTTGAG CAAGCAGGAT TTGCGCCATA CCGAAATATT GCCGCTGTAT
GCGCGCCTCT CCAGTCAGGA ACAGAACCGG GTATTTCAGT CGCACCATGG CCGCCGCATT
GTGCTGGCGA CCAATGTTGC GGAAACGTCG TTGACGGTGC CCGGCATCCG TTACGTCATC
GATCCGGGCA CTGCGCGCAT CAGCCGCTAC AGCTACCGAA CCAAGGTGCA GCGCCTGCCG
ATCGAGCCGA TTTCCCAAGC TTCCGCCAAC CAGCGCAAAG GCCGTTGCGG CCGTGTCGCG
GCGGGGATTT GTATTCGTCT CTATTCCGAA GCGGATTTCC TTTCCCGCCC AGAGTTTACC
GACCCGGAGA TTCTGCGCAC CAATCTGGCG TCGGTCATTT TGCAGATGAC GGCGCTCGGG
CTTGGCGATA TCTCCGCGTT CCCGTTTGTC GAGGCGCCGG ACAAGCGCAA TATTCAGGAC
GGCGTGCGTC TGCTGGAAGA ACTGGGCGCG CTCCAGACCG GAGACAGCGA CTATTACCGG
CTAACGCCGC AGGGGCGGCA ATTGGCGCAG TTGCCGATTG ATCCCCGGCT GGCAAGAATG
GTGCTGGAAG CGCGCAATAC CTCTTGTGTG CGCGAAGTGA TGATTATCAC CGCTGCGTTG
TCGATCCAGG ATCCGCGCGA GCGTCCGGCG GAGAAAAAAC AAGCGTCGGA CGAGAAACAC
CGGCGCTTTA CCGACAAAGA ATCTGACTTT TTGGCGTTCG TTAAGTTGTG GGATTACCTG
CAGGAACAAC AAAAAGCGCT GTCGTCCACC CAGTTTCGCC GGTTGTGTCG CAACGATTTT
CTCAATTACC TGCGTGTGCG CGAATGGCAG GATGTTTACA CCCAATTGCG TCAGGTGGTG
AAAGAACTGG GGTTCCCGGT CAACAGCGAA CCGACGGATT ACCGCAGCCT CCATTGCGCC
TTGCTGACCG GCCTGTTGTC GCATATTGGC CAGAAAGATG TGGAAAAACA GGAATTCAGC
GGTGCCCGCA ATACCAGGTT CGCTATTTTT CCCGGCTCTG GGTTATTCAA AAAACCGCCC
AAGTGGGCCA TGGTGGCCGA GCTGGTTGAA ACCAGTCGAC TGTGGGGGCG AGTGGCGGCG
CGTATCGAGC CGGAGTGGGT GGAACCCCTG TCGCAGCATT TGATCCGCCG TAGCTATAGC
GACCCCCATT GGGAGAAAGC GCAGGGGGCG GTGATGGCGC AGGAAAAGGT GACGTTGTAC
GGTTTGCCGC TGGTGGCGGC GCGTAAGGTC AACTACGGAA CGATCGACCC GGTCGTCTCA
CGGGAACTGT TTATCCGACA TGCGCTGGTG GAAGGCGACT GGCAAACCAC GCATGCGTTT
TTCCGCGCCA ATCTCCGGCT GCGTTCGGAG GTGGAAGAAC TGGAACACAA GTCCCGGCGG
CGGGATATTC TGGTGGATGA TGAAACGCTG TTTGCGTTCT ACGATCAGCG CATTCCGCAT
GAAATCGTCT CTTCCCGACA TTTTGACAGC TGGTGGACGC TCACCGGCAA GTCCCAGCCT
GATCTGCTGA ATTTTGAAAA AGGCATGCTG ATCAAGGAAG GCGCCGCGCG CGTCAGTGCG
CTGGACTATC CCAATTTCTG GCAGCAGGGT GATGTGCGCC TGCGTCTGAC CTACCAGTTT
GAGCCAGGTA CCGATGCTGA TGGCGTCACC GTGCATATTC CGTTACCGAT TCTGAATCAG
GTTGTGGAGG AAGGGTTTGA ATGGCAGATC CCGGGCATAC GTCGCGAGCT GATTATTGCG
TTGATTAAAT CGTTGCCGAA GCCCGTTCGC CGCAATTTTG TGCCGGCGCC CAACTATGCT
GAAGCGTTTC TGGCCCGGGT GACGCCGCAG CAGAAGGGCC TGCTGGATGC GCTGGAGCGT
GAATTACGGC TTATGACCGG CGTCACGATC GACCGGGAGG CTTGGCAATG GGATCAGGTA
CCCGATCATC TTAAAATCAC CTTCCGCGTA GTGGACGAAA AACAGAAGAC GCTGCGGGAA
GGCAAAAACC TGCGCGAATT GAAAGAACAG CTGCAGGATA ACGTCCAGCA GACGCTGTCC
GCGGTGGCGG ATGACGGCAT CGAGCAGCGC GATTTGCACA TCTGGAGCTT TGGCGATCTG
CCGGATTGCT ATGAGCAGAA GCGGGGCGGT TATTCGGTGA AAGCCTATCC GGCGCTGGTA
GACGAAAAAG AGAGCGTGGC CATTCGGTTG TTCGATTCGC CGCATCAGCA ACGTCAGATG
ATGTGGCGCG GGCAGCGCCG CCTGCTGCTG TTGAATATTC CCTCGCCAAT CAAATATCTG
CATGAAAAAT TGCCGAACAA AGCCAAGCTG GGTTTGTATT TCAACCCTTA CGGCAAAGTG
ATGGAACTGA TCGACGACTG CATTTCCTGC GGGGTGGACA AGCTGATGGA GGAGCATGGC
GGCCCGGTAT GGCAGGAGGC GGCGTTTCGT CAGTTACACG AGCAAGTACG TGCGGAGCTG
AATGAAACCG TGGTGGTGAT AGCCCGCCAG GTGGAGCAGA TTCTGACAAC GGTATTCGCC
ATTAACAAAC GGCTAAAAGG GCGGGTAGAT ATGGCGCTGG CCCTGGCGTT AAGCGATATC
AAAGCGCAGA TGAGCGGGTT GGTGTTCCGC GGGTTTGTCA CCGAGAACGG CTGGAAGCGT
CTGCCGGACG TGCTGCGTTA TCTGCAGGCC ATCGAACGCC GGTTGGATAA GCTGGCGCAG
GATGTTCATC GCGATCGGGC GCAGATGCTT AAAGTGGATC AGGTGACGCA GGCATGGCGG
CAATGGTTGA ACAAACTGCC CCCGGAGCGT CGTCACGACG AGGATGTCAC CGCCATTCGC
TGGATGCTGG AGGAGTTGCG GGTCAGCTAT TTCGCTCAGC AGTTGGGAAC ACCGTACCCC
ATTTCCGATA AACGCATTAT GCAGGCGATG GGGAATATTG AGGGATAG
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| Protein sequence | MTSPLHTLQA QLDELMLRDQ QRLRRRLQGA MKVNKPQAQA AIALEIGEEI AGARQRVERR
RASLPAISYP DTLPVSQKRE AILAAIRDHQ VVIVAGETGS GKTTQLPKMC LELGRGVRGL
IGHTQPRRLA ARSVANRIAE ELACEPGGAV GYKVRFNDQV GDNTLVKLMT DGILLAEIQQ
DRLLMQYDTL IIDEAHERSL NIDFILGYLK QLLPRRPDLK VIITSATIDP QRFSRHFSNA
PIVEVSGRTY PVDVRYRPVV DTEDDSDRDQ LQAILDAVDE ICHEGPGDIL VFMSGEREIR
DTADALSKQD LRHTEILPLY ARLSSQEQNR VFQSHHGRRI VLATNVAETS LTVPGIRYVI
DPGTARISRY SYRTKVQRLP IEPISQASAN QRKGRCGRVA AGICIRLYSE ADFLSRPEFT
DPEILRTNLA SVILQMTALG LGDISAFPFV EAPDKRNIQD GVRLLEELGA LQTGDSDYYR
LTPQGRQLAQ LPIDPRLARM VLEARNTSCV REVMIITAAL SIQDPRERPA EKKQASDEKH
RRFTDKESDF LAFVKLWDYL QEQQKALSST QFRRLCRNDF LNYLRVREWQ DVYTQLRQVV
KELGFPVNSE PTDYRSLHCA LLTGLLSHIG QKDVEKQEFS GARNTRFAIF PGSGLFKKPP
KWAMVAELVE TSRLWGRVAA RIEPEWVEPL SQHLIRRSYS DPHWEKAQGA VMAQEKVTLY
GLPLVAARKV NYGTIDPVVS RELFIRHALV EGDWQTTHAF FRANLRLRSE VEELEHKSRR
RDILVDDETL FAFYDQRIPH EIVSSRHFDS WWTLTGKSQP DLLNFEKGML IKEGAARVSA
LDYPNFWQQG DVRLRLTYQF EPGTDADGVT VHIPLPILNQ VVEEGFEWQI PGIRRELIIA
LIKSLPKPVR RNFVPAPNYA EAFLARVTPQ QKGLLDALER ELRLMTGVTI DREAWQWDQV
PDHLKITFRV VDEKQKTLRE GKNLRELKEQ LQDNVQQTLS AVADDGIEQR DLHIWSFGDL
PDCYEQKRGG YSVKAYPALV DEKESVAIRL FDSPHQQRQM MWRGQRRLLL LNIPSPIKYL
HEKLPNKAKL GLYFNPYGKV MELIDDCISC GVDKLMEEHG GPVWQEAAFR QLHEQVRAEL
NETVVVIARQ VEQILTTVFA INKRLKGRVD MALALALSDI KAQMSGLVFR GFVTENGWKR
LPDVLRYLQA IERRLDKLAQ DVHRDRAQML KVDQVTQAWR QWLNKLPPER RHDEDVTAIR
WMLEELRVSY FAQQLGTPYP ISDKRIMQAM GNIEG
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