Gene Dd703_1728 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDd703_1728 
Symbol 
ID8090324 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDickeya dadantii Ech703 
KingdomBacteria 
Replicon accessionNC_012880 
Strand
Start bp2054026 
End bp2055618 
Gene Length1593 bp 
Protein Length530 aa 
Translation table11 
GC content57% 
IMG OID644835813 
Productpeptidase dimerisation domain protein 
Protein accessionYP_002987347 
Protein GI242239166 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.189678 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCATTATT GTGGCAAAAC TATAATCGCG GGCGTATTGG GCGCCCTGAT GTTGAATTTT 
TCTGTCCACG CTCAGTGGAT CATGTCGCCG GCTGAAGCCC AGCGCTATGC GCAAGGGAGT
TTCCCCGACT ATCTTGACTC GTTAATGCTC AGCAATGACT CCGACGTGTC GTCTGATATC
CAACGCAACC TGAGTTGGAT GGATACCGCC TTCAAAAAAC GGGGGTTTAC CACCTACACC
ATTCCCAATG GCGCGCATCC CATGTTGTAT GCCGAGTGGG GAACCATGCA GGCAAGCCGT
AAGACCGTAT TATTTCTATT GCATTTTGAC GGCCCTCCGG TCACGGCTTC CGAGTGGAGC
AGTGAACCAT TCAAACCCAC GCTGAAATAC AAAGATAACC GTAACATCTG GCAGCCACTG
CCTAACGAGC GGCTGATGCA ATCGGCGATC GACCCGGAAT GGCGGGTATT CGCCCGCTCA
TCCTCGGACG GCAAAGGGGT GATCGGTATG TTTCTGGCGG CGATTGACGC ATTGAAAGGC
AACGGTGCGC CGCCGGCGGT GAATATCAAG GTGTTGCTGG ATTCGGAAGA AGAACGCGGC
TCGCCCCATC TGATGTCGGT CGTGACGCAG AATGCCGCCC GGTTGAAGAA CGACGGCGTG
GTGGTGCTCA ACGGCGCCAT GATGAGCAAT GACAATCCGT TGATAACGCT GGGGTATCGT
GGATCAATTC AGGTGGATAT GACGGTGTTT GGTCCGGATC CGGCGGCGCA CAGCGGTGCG
TTCGGCAATA TCGTCATCAA TCCGGCGCAG CAGTTGGCTA CCTTGCTGGC GGGGTTGAAA
GATGCCGATG GCCGGGTCAC GCTGCCCGGT TTTTATGACC GAGTGAAGCT GAGCGACGAA
GAGCGCCAAC TCATGGCGAA ACAGGCCCCG CCTAAAGGGG CGATTGAAAA CCGCTATGGG
GTGACGCAAT TGGATAAGGT GGCGGCCAAT CCGGTGGAAG CGGTACAGTA TCCCTCGCTG
GATATTATCG GGTTGAAGTC CGGCGATACC GGACGAAAAG CCATTTACGC GATTCCATCC
ACCGCCACTG CCAGCCTCAA TATCCGTACT GTGCCGGAGA CCTCGCCGGA TTATCTCTAC
GATCTGCTAA AACGTTATGT GCTCGCCAAA GGGTTTTATC TAACCCGTTC TGACGCACCC
TCGTTGCAAG AGCGCAACCA CAACCCGAAG TTGATTGCTA TGAATATGCT GACGGCGGGC
GGCAGCTCCT ACGCAGTCCG CACACAATTT GGCGCGCCGC TGGCGAAGTG GGTAAGTGAG
GGGTTGACGG CGACGCGCAA GGTTGAGCCC GACAAAAACC GCATGCTGGG CGTCTCGCCG
CCGATCAATG GCGCGCTGGC GCAACTGAAA AGCGCGTTCG CTGTGGTGCC GCTGGTGAAT
GCCGACAACA ATGCGGCCAG TTATGACGAG AACTTGCGTG TCGGTAACTA TCTGGAAGGT
GTGCGCACCC TTGTGTCTCT GCTGACCACG CCGTTTCCGG CGGATGAGCC CGAGCCGCCG
CGCCAGTCTG CCCAGTCGAT CAAAACGCGC TGA
 
Protein sequence
MHYCGKTIIA GVLGALMLNF SVHAQWIMSP AEAQRYAQGS FPDYLDSLML SNDSDVSSDI 
QRNLSWMDTA FKKRGFTTYT IPNGAHPMLY AEWGTMQASR KTVLFLLHFD GPPVTASEWS
SEPFKPTLKY KDNRNIWQPL PNERLMQSAI DPEWRVFARS SSDGKGVIGM FLAAIDALKG
NGAPPAVNIK VLLDSEEERG SPHLMSVVTQ NAARLKNDGV VVLNGAMMSN DNPLITLGYR
GSIQVDMTVF GPDPAAHSGA FGNIVINPAQ QLATLLAGLK DADGRVTLPG FYDRVKLSDE
ERQLMAKQAP PKGAIENRYG VTQLDKVAAN PVEAVQYPSL DIIGLKSGDT GRKAIYAIPS
TATASLNIRT VPETSPDYLY DLLKRYVLAK GFYLTRSDAP SLQERNHNPK LIAMNMLTAG
GSSYAVRTQF GAPLAKWVSE GLTATRKVEP DKNRMLGVSP PINGALAQLK SAFAVVPLVN
ADNNAASYDE NLRVGNYLEG VRTLVSLLTT PFPADEPEPP RQSAQSIKTR