Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dd703_1728 |
Symbol | |
ID | 8090324 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dickeya dadantii Ech703 |
Kingdom | Bacteria |
Replicon accession | NC_012880 |
Strand | + |
Start bp | 2054026 |
End bp | 2055618 |
Gene Length | 1593 bp |
Protein Length | 530 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 644835813 |
Product | peptidase dimerisation domain protein |
Protein accession | YP_002987347 |
Protein GI | 242239166 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.189678 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCATTATT GTGGCAAAAC TATAATCGCG GGCGTATTGG GCGCCCTGAT GTTGAATTTT TCTGTCCACG CTCAGTGGAT CATGTCGCCG GCTGAAGCCC AGCGCTATGC GCAAGGGAGT TTCCCCGACT ATCTTGACTC GTTAATGCTC AGCAATGACT CCGACGTGTC GTCTGATATC CAACGCAACC TGAGTTGGAT GGATACCGCC TTCAAAAAAC GGGGGTTTAC CACCTACACC ATTCCCAATG GCGCGCATCC CATGTTGTAT GCCGAGTGGG GAACCATGCA GGCAAGCCGT AAGACCGTAT TATTTCTATT GCATTTTGAC GGCCCTCCGG TCACGGCTTC CGAGTGGAGC AGTGAACCAT TCAAACCCAC GCTGAAATAC AAAGATAACC GTAACATCTG GCAGCCACTG CCTAACGAGC GGCTGATGCA ATCGGCGATC GACCCGGAAT GGCGGGTATT CGCCCGCTCA TCCTCGGACG GCAAAGGGGT GATCGGTATG TTTCTGGCGG CGATTGACGC ATTGAAAGGC AACGGTGCGC CGCCGGCGGT GAATATCAAG GTGTTGCTGG ATTCGGAAGA AGAACGCGGC TCGCCCCATC TGATGTCGGT CGTGACGCAG AATGCCGCCC GGTTGAAGAA CGACGGCGTG GTGGTGCTCA ACGGCGCCAT GATGAGCAAT GACAATCCGT TGATAACGCT GGGGTATCGT GGATCAATTC AGGTGGATAT GACGGTGTTT GGTCCGGATC CGGCGGCGCA CAGCGGTGCG TTCGGCAATA TCGTCATCAA TCCGGCGCAG CAGTTGGCTA CCTTGCTGGC GGGGTTGAAA GATGCCGATG GCCGGGTCAC GCTGCCCGGT TTTTATGACC GAGTGAAGCT GAGCGACGAA GAGCGCCAAC TCATGGCGAA ACAGGCCCCG CCTAAAGGGG CGATTGAAAA CCGCTATGGG GTGACGCAAT TGGATAAGGT GGCGGCCAAT CCGGTGGAAG CGGTACAGTA TCCCTCGCTG GATATTATCG GGTTGAAGTC CGGCGATACC GGACGAAAAG CCATTTACGC GATTCCATCC ACCGCCACTG CCAGCCTCAA TATCCGTACT GTGCCGGAGA CCTCGCCGGA TTATCTCTAC GATCTGCTAA AACGTTATGT GCTCGCCAAA GGGTTTTATC TAACCCGTTC TGACGCACCC TCGTTGCAAG AGCGCAACCA CAACCCGAAG TTGATTGCTA TGAATATGCT GACGGCGGGC GGCAGCTCCT ACGCAGTCCG CACACAATTT GGCGCGCCGC TGGCGAAGTG GGTAAGTGAG GGGTTGACGG CGACGCGCAA GGTTGAGCCC GACAAAAACC GCATGCTGGG CGTCTCGCCG CCGATCAATG GCGCGCTGGC GCAACTGAAA AGCGCGTTCG CTGTGGTGCC GCTGGTGAAT GCCGACAACA ATGCGGCCAG TTATGACGAG AACTTGCGTG TCGGTAACTA TCTGGAAGGT GTGCGCACCC TTGTGTCTCT GCTGACCACG CCGTTTCCGG CGGATGAGCC CGAGCCGCCG CGCCAGTCTG CCCAGTCGAT CAAAACGCGC TGA
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Protein sequence | MHYCGKTIIA GVLGALMLNF SVHAQWIMSP AEAQRYAQGS FPDYLDSLML SNDSDVSSDI QRNLSWMDTA FKKRGFTTYT IPNGAHPMLY AEWGTMQASR KTVLFLLHFD GPPVTASEWS SEPFKPTLKY KDNRNIWQPL PNERLMQSAI DPEWRVFARS SSDGKGVIGM FLAAIDALKG NGAPPAVNIK VLLDSEEERG SPHLMSVVTQ NAARLKNDGV VVLNGAMMSN DNPLITLGYR GSIQVDMTVF GPDPAAHSGA FGNIVINPAQ QLATLLAGLK DADGRVTLPG FYDRVKLSDE ERQLMAKQAP PKGAIENRYG VTQLDKVAAN PVEAVQYPSL DIIGLKSGDT GRKAIYAIPS TATASLNIRT VPETSPDYLY DLLKRYVLAK GFYLTRSDAP SLQERNHNPK LIAMNMLTAG GSSYAVRTQF GAPLAKWVSE GLTATRKVEP DKNRMLGVSP PINGALAQLK SAFAVVPLVN ADNNAASYDE NLRVGNYLEG VRTLVSLLTT PFPADEPEPP RQSAQSIKTR
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