| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd703_1721 |
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| Symbol | pspF |
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| ID | 8090317 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dickeya dadantii Ech703 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012880 |
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| Strand | - |
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| Start bp | 2048469 |
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| End bp | 2049464 |
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| Gene Length | 996 bp |
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| Protein Length | 331 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 644835806 |
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| Product | phage shock protein operon transcriptional activator |
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| Protein accession | YP_002987340 |
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| Protein GI | 242239159 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG1221] Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain |
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| TIGRFAM ID | [TIGR02974] psp operon transcriptional activator PspF |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0328875 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACTCACG ACAATGAATC CCTGCTGGGC GAAGCCAATC GCTTTTTGGA GGTACTGGAG
CAGGTCTCCC AGCTGGCGCC GCTTAACAAA CCGGTTCTGG TGATTGGCGA ACGCGGTACC
GGCAAGGAGC TGATCGCCAG CCGCCTGCAT TATCTCTCCG CTCGCTGGCA AGGCGCGTTC
ATTTCCCTCA ACTGCGCTGC GCTGAACGAA AATCTGCTGG ATTCAGAACT ATTCGGTCAT
GAAGCCGGCG CGTTCACCGG CGCACAACGG CGTCATCTGG GGCGATTTGA GCGCGCGGAC
GGCGGTACGC TGTTTCTTGA CGAACTGGCG ACCGCGCCGA TGCTGGTGCA GGAAAAACTG
TTGCGGGTGA TCGAATACGG TGTGCTGGAG CGCGTGGGCG GCAGCCAACC GCTACAGGTG
GACGTGCGTT TGGTTTGTGC CACCAACGAG GATCTGCCGG CGCTGGCGGC GGCTGGCAAG
TTCCGCGCCG ATCTGCTTGA CCGGCTGGCA TTTGACGTGG TGCACCTGCC GCCGCTACGG
GCGCGTCAGC AAGACATCAT GTTGCTCGCA CAGCATTTCG CAGTCCAAAT GTGCCGTGAA
TTGCGGCTGC CGCTGTTTCC CGGTTTTACC CCCAATGCCG AGCACATTTT GCTCAGCTAC
CCTTGGCCCG GCAACATTCG CGAGTTGAAA AACGTAGTGG AACGCTCGGT CTACCGTCAC
GGCGACAGCG AGCAGGCGCT GGATCGCATC ATCCTCAACC CGTTCCAGTC GCAGACATTC
CCCGCCATCG AGGCGAAAAC CGCCGCCGCG CCAACAGCCC TGCCCGCACT GCCACTGGAT
CTACGCAGCT GGCAGCACGA CCAGGAACAA CAGCTGGTGC GGCAGGCGTT GCAGCAAGCC
CGCTTCAACC AGCGCAAGGC GGCGGAACTG CTGGGTGTGA CCTACCATCA ATACCGCGGC
CTGTTGAAGA AACACGCCAT GAGTGATGAT GAATAA
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| Protein sequence | MTHDNESLLG EANRFLEVLE QVSQLAPLNK PVLVIGERGT GKELIASRLH YLSARWQGAF
ISLNCAALNE NLLDSELFGH EAGAFTGAQR RHLGRFERAD GGTLFLDELA TAPMLVQEKL
LRVIEYGVLE RVGGSQPLQV DVRLVCATNE DLPALAAAGK FRADLLDRLA FDVVHLPPLR
ARQQDIMLLA QHFAVQMCRE LRLPLFPGFT PNAEHILLSY PWPGNIRELK NVVERSVYRH
GDSEQALDRI ILNPFQSQTF PAIEAKTAAA PTALPALPLD LRSWQHDQEQ QLVRQALQQA
RFNQRKAAEL LGVTYHQYRG LLKKHAMSDD E
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