| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd703_1720 |
|---|
| Symbol | |
|---|
| ID | 8090316 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dickeya dadantii Ech703 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012880 |
|---|
| Strand | + |
|---|
| Start bp | 2047211 |
|---|
| End bp | 2048401 |
|---|
| Gene Length | 1191 bp |
|---|
| Protein Length | 396 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 644835805 |
|---|
| Product | cobalamin synthesis protein P47K |
|---|
| Protein accession | YP_002987339 |
|---|
| Protein GI | 242239158 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0523] Putative GTPases (G3E family) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.00319553 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCTCCTT TACCCGTCAC GGTGCTGTCC GGTTTTCTGG GCGCAGGCAA AACCACCGTA
CTTAACCATA TTCTGAACAA TCGTCAGGGG CGCCGGGTGG CGGTGATCGT CAATGACATG
AGCGAAGTGA ATATTGACGC CGACCTGGTC AACAATGAGG TCACACTCGA TCATCGCCAG
GAAAAACTGG TGTCGATGAG TAATGGCTGC ATCTGTTGCA CCTTGCGTGA AGATTTGCTG
GTTGCCGTGC GCGAACTGGC GCAAACCGGC CGTTACGACT ATTTGCTGAT CGAGTCCAGC
GGTATATCCG AACCGCTGCC GGTGGCGGAA ACGTTCACCT TTGAAGATGA AAACGGGCAG
CGCCTGTCGG ATTTCGCCCG GCTGGATACG CTGGTGACTG TGGTGGATGG CGTCAATTTT
CTGCAGCAAT ATCAGGAAGC GCAGAGTTTG CAAGAGGCGG GAGAAAGCCT GGGCGAAGAT
GATGAGCGCA GCGTGTCCGA ACTGCTTATC GAACAGATCG AATTCTGTGA TGTGTTGCTG
GTGAGTAAGA CTGATGAAAT GGACGCCGAA CAGCGTAATG AGGTGATGGC GGTTCTGCAT
AGCTTGAACC CTGAAGCGCG CATTCTGCCG ATTGCACATG GTCAGGTTGA ACTGGATGAA
GTGCTGAATA CCGGTCGCTT TAGTTTCGAC AAGGCATCGA TGGCGCCGGG ATGGCTGCGC
GAATTACGCG GCGCGCATAC CCCGGAAACG GAAAGCTATG GCATCAGCAG TTTTGTGTAT
CAGGCGCGTC GGCCGTTCGA TCCCATGCGG TTCTACCGTT TTCTGGAACA GGCTGATTGG
GGCACTGGGC GCCTGCTGCG TTCAAAAGGT TTCTTTTGGC TGGCGAGTAG GCCGTTTGAT
GCCGGTTCCT GGCATCAGGC GGGCGGCGTG TTGCGTTATG GTTATGCGGG GCGATTCTGG
AAGTCGATTC CACGCGAACA TTGGCCGCAG GATGAAGCGG CGCAGGCGGC TATCGACGAG
AAATGGCAGG AGCCTTTCGG CGATATGCGC CAGGAAATTG TCTTTATCGG GCAGAATCTG
GATCGGGCAT GGATTGTCCG CCAATTAGAT GACAGCCTGT TGACGGATGA ACAGTTGCTG
GCGGGTGTCG ACAGTTGGCA GACGCTGGAA GATCCGTTCG AGCCCTGGTG A
|
|---|
| Protein sequence | MPPLPVTVLS GFLGAGKTTV LNHILNNRQG RRVAVIVNDM SEVNIDADLV NNEVTLDHRQ
EKLVSMSNGC ICCTLREDLL VAVRELAQTG RYDYLLIESS GISEPLPVAE TFTFEDENGQ
RLSDFARLDT LVTVVDGVNF LQQYQEAQSL QEAGESLGED DERSVSELLI EQIEFCDVLL
VSKTDEMDAE QRNEVMAVLH SLNPEARILP IAHGQVELDE VLNTGRFSFD KASMAPGWLR
ELRGAHTPET ESYGISSFVY QARRPFDPMR FYRFLEQADW GTGRLLRSKG FFWLASRPFD
AGSWHQAGGV LRYGYAGRFW KSIPREHWPQ DEAAQAAIDE KWQEPFGDMR QEIVFIGQNL
DRAWIVRQLD DSLLTDEQLL AGVDSWQTLE DPFEPW
|
|---|
| |