| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd703_1699 |
|---|
| Symbol | ribA |
|---|
| ID | 8090295 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dickeya dadantii Ech703 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012880 |
|---|
| Strand | - |
|---|
| Start bp | 2021725 |
|---|
| End bp | 2022318 |
|---|
| Gene Length | 594 bp |
|---|
| Protein Length | 197 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 644835784 |
|---|
| Product | GTP cyclohydrolase II |
|---|
| Protein accession | YP_002987318 |
|---|
| Protein GI | 242239137 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0807] GTP cyclohydrolase II |
|---|
| TIGRFAM ID | [TIGR00505] GTP cyclohydrolase II |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.00137979 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAGCTAA AACGGGTGGC GGAAGCCAAA CTACCCACCC CGTGGGGCGA CTTCCTGATG
GTAGGCTTTG AGGAAACGGC GACCGGTCGC GATCACCTGG CGCTGGTCTA TGGCGATATT
TCCGGCGCAG AGCCGGTACT GGCCCGGGTA CATTCAGAAT GCCTGACGGG AGATGCGCTG
TTTAGTCTGC GCTGTGACTG CGGCTTTCAG TTGGAAGCTG CGCTGAGCCA TATCGCTGAA
GCAGGGCGCG GCGTGTTGCT TTACCACCGT CAGGAAGGCC GTAATATCGG CCTGTTGAAC
AAGATTCGCG CCTATGCGCT GCAGGATCAG GGCGCAGATA CCGTGGAAGC CAACCATCAG
TTGGGATTCG CCGCCGACGA GCGGGACTTC ACACTGTGTG CAGACATGTT CAAATTATTG
AATGTCGATG CCATACGACT GCTGACCAAC AACCCTAAAA AAGTTGAGAT ATTGGCGGAA
GCCGGCATCA ATATCACCGA GAGAGTGCCG CTTATTGTCG GCCGCAATCC GAAGAACGAA
AAATATCTGA AGACCAAGGC GGCCAAAATG GGCCACCTGC TGGATATCAA GTAA
|
|---|
| Protein sequence | MQLKRVAEAK LPTPWGDFLM VGFEETATGR DHLALVYGDI SGAEPVLARV HSECLTGDAL
FSLRCDCGFQ LEAALSHIAE AGRGVLLYHR QEGRNIGLLN KIRAYALQDQ GADTVEANHQ
LGFAADERDF TLCADMFKLL NVDAIRLLTN NPKKVEILAE AGINITERVP LIVGRNPKNE
KYLKTKAAKM GHLLDIK
|
|---|
| |