| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd703_1580 |
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| Symbol | |
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| ID | 8090174 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dickeya dadantii Ech703 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012880 |
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| Strand | + |
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| Start bp | 1869527 |
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| End bp | 1870486 |
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| Gene Length | 960 bp |
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| Protein Length | 319 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 644835665 |
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| Product | pseudouridine synthase, RluA family |
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| Protein accession | YP_002987201 |
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| Protein GI | 242239020 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
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| TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.000241554 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAACAG AGAATCCAAC CGTACAATTC ATGACGATTT CCTCCGAGGA AGCTGGTCAG
CGAATCGACA ACTTTTTGCG TGTGCGCCTG AAAGGTGTGC CTAAAAGCAT GATTTATCGC
ATTCTGCGTA AAGGTGAAGT GCGGATAAAT AAAAAGCGCG TAAAACCGGA ATATAAGTTA
CTTGACGGCG ATGAGGTTCG TATCCCTCCC GTGCGTCAAT CTGAACGCGA CGTGCCTGAG
GTGTCTGCCA GTCTGGACAA AGTATCCTCT CTGACTCATT GCATTCTCTA TGAAGATGAC
TATCTGTTGG TGCTGAATAA ACCGTCGGGA ACGGCTGTTC ACGGTGGTAG TGGATTGAGT
TTCGGTGTGA TTGAGGGGCT CCGGGCGCTG CGCCCTGAAG CGCGTTTTCT TGAGTTAGTA
CATCGGCTCG ATCGCGATAC GTCTGGCGTC CTTTTGGTGG CCAAAAAGCG CTCAGCTTTG
CGTGCGCTCC ATGAGCAGTT ACGTAGTAAA GGTATGCAGA AAGATTATCT GGCTCTGGTC
AGGGGACAGT GGCAATCGCA CTGTAAATCC GTGCAGGCGC CGTTGCTTAA AAATATTCTG
AAAAGCGGGG AGCGTATCGT GCGGGTCAAT GGCGAAGGTA AGCCTTCCGA AACCTTGTTT
AAGGTTGAAG AACGGTTTGA TTGCGCGACG TTGGTCAAAG CCAGCCCGGT AACTGGCCGA
ACCCATCAGA TTAGAGTCCA TGCCCAATAT GCGGGACATC CGATCGCGTT TGACGATCGT
TATGGAGATC GCGCGTTCGA TCAACAGCTT GCCGATACCG GGTTGAAGCG GCTTTTTTTG
CACGCGCATG CGCTACGGCT TGAGCATCCG CATACAGGGG AGACATTACG CTTTGAGGCC
CCCCTGGACG ATGCGTTGCG CCGTTGCTTG CAATTGTTGC GTCAGCGCAG CGGGAAGTAA
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| Protein sequence | MKTENPTVQF MTISSEEAGQ RIDNFLRVRL KGVPKSMIYR ILRKGEVRIN KKRVKPEYKL
LDGDEVRIPP VRQSERDVPE VSASLDKVSS LTHCILYEDD YLLVLNKPSG TAVHGGSGLS
FGVIEGLRAL RPEARFLELV HRLDRDTSGV LLVAKKRSAL RALHEQLRSK GMQKDYLALV
RGQWQSHCKS VQAPLLKNIL KSGERIVRVN GEGKPSETLF KVEERFDCAT LVKASPVTGR
THQIRVHAQY AGHPIAFDDR YGDRAFDQQL ADTGLKRLFL HAHALRLEHP HTGETLRFEA
PLDDALRRCL QLLRQRSGK
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