| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd703_1579 |
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| Symbol | |
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| ID | 8090173 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dickeya dadantii Ech703 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012880 |
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| Strand | - |
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| Start bp | 1865765 |
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| End bp | 1868947 |
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| Gene Length | 3183 bp |
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| Protein Length | 1060 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 644835664 |
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| Product | ribonuclease, Rne/Rng family |
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| Protein accession | YP_002987200 |
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| Protein GI | 242239019 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1530] Ribonucleases G and E |
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| TIGRFAM ID | [TIGR00757] ribonuclease, Rne/Rng family |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00521114 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAGAA TGTTGATTAA CGCAACTCAG CAAGAAGAGT TGCGTGTTGC TTTGGTTGAT
GGTCAACGGC TTTACGATCT GGATATCGAA AGTCCAGGAC ATGAGCAAAA AAAAGCGAAT
ATTTACAAAG GTAAAATTAC GCGCATCGAA CCCAGTCTGG AAGCGGCCTT CGTTGATTAT
GGCGCTGAAC GACACGGTTT CCTTCCTCTT AAAGAAATCG CTCGCGAATA TTTTCCCAAC
AATTACTCAT CCCATGGCCG CCCTAACATC AAAGATGTTT TGCGTGAAGG CCAGGAAGTG
ATTGTTCAGG TAGATAAGGA AGAACGCGGC AACAAAGGGG CAGCACTAAC CACATTTATC
AGCCTTGCGG GCAGTTATCT GGTTCTTATG CCAAACAACC CCAGAGCCGG CGGCATTTCC
CGCCGCATCG AAGGTGATGA CCGTACCGAG CTGAAAGAAG CGCTGAGCGC ATTGCAGTTG
CCTGACGGTA TGGGGTTGAT CGTCAGAACC GCCGGCGTCG GCAAATCGGC TGATGCGTTG
CAGTGGGATC TGGCATTCCG TCTCAAACAC TGGGAGGCCA TCAAGAAAGC GGCTGAAGGG
CGCTCGGCGC CATTCCTGAT TCATCAGGAG AGCAATGTTA TTGTTCGCGC TTTCCGTGAT
TATCTGCGCC CGGATATCGG CGAAATTCTT ATCGATAACC CCAAAGTTCT GGAACTGGCC
AAGGAGCATA TTGCGGCGTT GGGCCGTCCT GACTTCAGCA GCAAAATCAA ACTGTACACC
GGCGAGATCC CGTTGTTCAG CCATTATCAA ATCGAATCTC AAATTGAGTC CGCTTTCCAG
CGCGAAGTGC GTCTGCCTTC CGGCGGTTCA ATTGTTATCG ACACCACCGA AGCGCTGACC
GCTATCGATA TCAACTCGGC ACGCGCAACC CGTGGCGGTG ATATCGAAGA GACGGCATTT
AATACCAACC TGGAAGCCGC CGACGAAATT GCACGCCAAC TCCGTCTGCG TGATTTGGGT
GGATTGATCG TCATCGACTT TATTGATATG ACCCCGGTTC GTCATCAGCG CGAGGTGGAA
AACCGCCTGC GGGAAGCTGT CCGCCAGGAT CGCGCCCGCA TCCAGATCGG CAGGATTTCC
CGTTTTGGTC TGCTGGAGAT GTCTCGTCAG CGCCTGAGTC CGTCGCTGGG TGAGTCCAGC
CATCACGTCT GTCCGCGTTG TAGCGGCACC GGCACGATTC GCGACAATGA ATCGCTGTCG
CTGTCTATCC TGCGACTGAT TGAAGAAGAG GCGCTGAAAG AAAATACGCA AGAAGTGCAT
GCCATCGTGC CAGTACCTAT CGCGTCCTAC TTGCTGAATG AAAAACGCGA TGCGGTTAAT
GCGATTGAAA AACGTCAAGG CGGCGTTCGC GCAATCATCG TGCCGCACGA TGGCATGGAA
ACCCCGCATT ATTCTGTTCT TCGCATCCGT AAAGGCGAAG AAAAACAGGC GTTGAGTTAT
ATGTTGCCGC AATTGCTGGA GTCGGAAACA CAGCAAACCA GCGATGAACC TGCGCCAGAG
AGGAAGATGC CGGAACAACC CGCACTGGCA TCATTCACCA TTCCAGATAT TCCTCCTGTT
GAATCTCAGC AGCCGGTACA GGAAACGTCG AACAGCACGA CCAGCACTGG CACCGAACGC
CCAGGCATAC TGGGCCGTAT GATAGGCGCA TTGAAAAATC TGTTTGGCGG CGCAGCCGAA
GCGGATGTGA AGCCAGAAGA AATCGCAGCA GTCCATACGG AAGAAGAGCA GAAACAGGAA
CGACGAAATG GGCGCCGTCA ATCAAATCGC AGAGATCGCG GGCAACGGGA TAATCGCGAA
CCACGTGAGC GCGACGAGCA GCGCCGGGCT AAGCGCGCGC AGCAGGCTGC TGCGCCAGAA
CCCACAGAGA CTGTCATTGA AGACGTTCAG GATAAAACAC CTGACCGCGA CGCCCGAGAC
GAGCAGCGTC GAGAACAACG TGTGGAGCGT CAGCGCCGTC GTCAGGAAGA CAAACGTCAG
GCTCAGCAGG AAATCAAGGA TCTGAATGGC AGCGTGACCG AAATCGATGA TGAAACATCC
GCCGATCAGG AAAAACCCGC GCCAGTGATG GTTCGGCGCC AGCGTCGTCA GTTAAGTCAG
AAGATTCGCA TTAACAATAC TGACGAACGC ACTGAAAGCG ACAGCGTCAC TCCTGTTTCT
TCCGATGCCG GAACTGCACT GCCATTGCTG GAAGCTCCTG TTACCCTTGT ACCGGTTGCC
GATACTGCGG AAGCGGCTGA AATTGATGTA AATACAGAGA CGCCTCGTGA AAACGGCTTG
CCGCGTCGTT CCCGTCGTTC TCCCCGTCAT TTGCGGGTGA GCGGCCAACG TCGTCGCCGC
TATCGTGATG AACGCTATCC TATCGTGTCG CCTATGCCGT TGGTACAGGC ATCCGCCTCG
CCGGAAATGG CATCTGGTAA GGTGTGGGTT CATTATCCGG TGGTTCAGCC TGTGGTGGCA
GAGGTCTTCG AACAGAATAA TGGTGATGCG GACATCATTC AGGAAGTGAC TGAACAGGCT
AGTATTATCT CGACCCCTGT CGAAATACCC GCTGCGTTTC AACATGAAGA AAGCGCCGTA
GCGGAAGCCA CAACACAGCC AGTAGAGCCA GCAACCGTTT CCATGGAATT AACCATTCCG
TCACAGAACG ATGCTGAACT GCAGCCGATT GTTGAACCAC AGCCGATTGT TGAACCGTCG
ATTGTTGAAC CGTCGATTGC TACCGCCGAT GTCGATGTTC TGGAACCCAC GGAAGAAGCG
GTTGCCGTGA TGCCATCGCC CGTCGCGACT GACGAGAAAA TCGCACCGGT AACGCATCAT
ATCGCCACCG CTTCCGAGCA GGATACTCAG GCCGAAATGC AAACCGAGGT TCAGAGTGTT
GTCGCATCGG CCGAAGAAAC TGCAGGTAAC GTTGTGCCGA CGATTAGCAG TGACGAACCG
CTGCGCCACC CGCGACACGC GACAGCGCCA ATGACGAAAG CCCCTGCACC GGCTTATATT
CCGGATGCAC CGCACATCAG CGACTGGCAA CGTCCGGCTT ATCAGTTCTC TGGCAAAGGC
GCTGCGGGCG GGCATTCTGC AGTCAATCAG TCCAGCGCGC CGGCCACCCA ACCGGAAGAG
TAA
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| Protein sequence | MKRMLINATQ QEELRVALVD GQRLYDLDIE SPGHEQKKAN IYKGKITRIE PSLEAAFVDY
GAERHGFLPL KEIAREYFPN NYSSHGRPNI KDVLREGQEV IVQVDKEERG NKGAALTTFI
SLAGSYLVLM PNNPRAGGIS RRIEGDDRTE LKEALSALQL PDGMGLIVRT AGVGKSADAL
QWDLAFRLKH WEAIKKAAEG RSAPFLIHQE SNVIVRAFRD YLRPDIGEIL IDNPKVLELA
KEHIAALGRP DFSSKIKLYT GEIPLFSHYQ IESQIESAFQ REVRLPSGGS IVIDTTEALT
AIDINSARAT RGGDIEETAF NTNLEAADEI ARQLRLRDLG GLIVIDFIDM TPVRHQREVE
NRLREAVRQD RARIQIGRIS RFGLLEMSRQ RLSPSLGESS HHVCPRCSGT GTIRDNESLS
LSILRLIEEE ALKENTQEVH AIVPVPIASY LLNEKRDAVN AIEKRQGGVR AIIVPHDGME
TPHYSVLRIR KGEEKQALSY MLPQLLESET QQTSDEPAPE RKMPEQPALA SFTIPDIPPV
ESQQPVQETS NSTTSTGTER PGILGRMIGA LKNLFGGAAE ADVKPEEIAA VHTEEEQKQE
RRNGRRQSNR RDRGQRDNRE PRERDEQRRA KRAQQAAAPE PTETVIEDVQ DKTPDRDARD
EQRREQRVER QRRRQEDKRQ AQQEIKDLNG SVTEIDDETS ADQEKPAPVM VRRQRRQLSQ
KIRINNTDER TESDSVTPVS SDAGTALPLL EAPVTLVPVA DTAEAAEIDV NTETPRENGL
PRRSRRSPRH LRVSGQRRRR YRDERYPIVS PMPLVQASAS PEMASGKVWV HYPVVQPVVA
EVFEQNNGDA DIIQEVTEQA SIISTPVEIP AAFQHEESAV AEATTQPVEP ATVSMELTIP
SQNDAELQPI VEPQPIVEPS IVEPSIATAD VDVLEPTEEA VAVMPSPVAT DEKIAPVTHH
IATASEQDTQ AEMQTEVQSV VASAEETAGN VVPTISSDEP LRHPRHATAP MTKAPAPAYI
PDAPHISDWQ RPAYQFSGKG AAGGHSAVNQ SSAPATQPEE
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