| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd703_1540 |
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| Symbol | fliF |
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| ID | 8090133 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dickeya dadantii Ech703 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012880 |
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| Strand | + |
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| Start bp | 1822054 |
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| End bp | 1823763 |
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| Gene Length | 1710 bp |
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| Protein Length | 569 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 644835625 |
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| Product | flagellar MS-ring protein |
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| Protein accession | YP_002987162 |
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| Protein GI | 242238981 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1766] Flagellar biosynthesis/type III secretory pathway lipoprotein |
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| TIGRFAM ID | [TIGR00206] flagellar basal-body M-ring protein/flagellar hook-basal body protein (fliF) |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCTCCG TGAAAAGCAG TTCGCCCGCG ATGAGTATGA ACGGATTTAC TGCTGTACTT
AATCGGCTAC GCGCTAACCT AAGAGTGCCA CTGCTTATTG CTGCGGCATT TGCGGTAGCC
GTTGTGACAG CATTGGCTTT ATGGGCTAAA AGTCCTGATT ATAGAGTGCT TTACAGCAAT
CTTAACGATC GTGATGGTGG CGAAGTCGTC ACTCAACTGA CGCAAATGAA CGTGCCATAT
CGTTTTGCTG ACAATGGCGG TGCGATACTT ATTCCCTCCG ACAAAATTTA TGACACCCGT
TTGCGACTGG CGCAACTTGG GCTACCGAAA GGCGGTGCCG TAGGGTTTGA ACTGCTTGAT
CAAGAGAAGT TCGGGATCAG CCAGTTTAGT GAACAGATTA ATTATCAACG CGCGCTGGAA
GGCGAATTGT CCAGAACGAT TGAGACGCTC GGTCCTGTTC ATAGCGCCCG CGTTCATCTG
GCTATCCCTA AACCTTCGCT TTTTGTCCGG GAACAAAAAT CACCGTCAGC CTCGGTGACG
CTGAACCTGC AACCAGGCAG AGCGCTTGAT GAAGGGCAGA TTAACGCCAT TGTTTATATG
GTTTCCAGCA GTGTCTCTGG GCTGCCGCCT GAGAATGTAA CGGTTGTCGA TCAAAACGGT
CGTCTTTTGA GCCAAACGGA TGCGGCGGGA CGTGATCTGA ACGCGGCGCA GCTCAAATAT
GCGACGGAAG TTGAAGGTCG TTATCAGCGT CGTATCGAGG CCATTCTGAC GCCAATCGTC
GGTATGGGGA ATGTGCATGC GCAAGTGACG GCTCAGATCG ATTTTTCAAA CCGTGAGCAA
ACCGACGAAC AATATCAGCC CAATCAAACA CCGAATCAGG CTGCTGTGCG TTCGCAGCAA
TCAAGTCAAA GTGAGCAATT GGGTGGTAGA AATATTGGCG GCGTACCTGG TGCATTGTCG
AACCAGCCGT CCGCAACACC AACGGCACCG GTTACTACAC CCGGCAATCA GACCAATCAA
AATAATGCCA GTCAGACAAA TGCGGCGAAC AATGCCAGCG CTGGCGCACA GGCGGGGACG
TCCGCTTCAG GGTTACAGTC TTCAAATACT CGTCGGGATT CGACGATCAA CTATGAGGTT
GACCGGACGA TTCGTCATAC CAAGCAAAGT GCGGGCAATG TCCAGCGTCT TTCTGTGGCG
GTAGTTGTCA ATTATGCGCT GAATAGCGAA GGTAAGGCTG CTGCATTAAG TGAAGAGCAG
GTTAAGCAGA TCGAATCTCT GACCCGTGAA ACAATGGGAT TCTCAAGTGA TCGGGGCGAT
ACCCTTAATG TTGTGAATGC GCCGTTCAAT GAAGTGACGG ATGGTAGCGG AGAATTGCCC
TTCTGGCAGA AACAGGCGTT TCTTGACCTC GTAACCAGCA TTGGCAAGTG GCTGTTGGTT
TTGCTGGTCG CCTGGATTCT GTGGCGCAAA ACAGTACGAC CTCAGATGCA GAAACGAGCC
CAACAGCAGG CACTTATGGA AGGGCTCTCC GCCGCAAAAC AGGAAGAGGA TATTGTTGTC
CAGCTTAGTC GTGAGGAGCA GGAACAGCAG CGGAAATCGC AGCAGCGTGT CCACGCTGAA
AATCAGAGCC AGCGAATTCG TGACCTGGCT GAAAGCGAAC CGCGCGTCTG CGCCTTGGTT
ATTCGCCAAT GGATGAGTAC TGAACTATGA
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| Protein sequence | MSSVKSSSPA MSMNGFTAVL NRLRANLRVP LLIAAAFAVA VVTALALWAK SPDYRVLYSN
LNDRDGGEVV TQLTQMNVPY RFADNGGAIL IPSDKIYDTR LRLAQLGLPK GGAVGFELLD
QEKFGISQFS EQINYQRALE GELSRTIETL GPVHSARVHL AIPKPSLFVR EQKSPSASVT
LNLQPGRALD EGQINAIVYM VSSSVSGLPP ENVTVVDQNG RLLSQTDAAG RDLNAAQLKY
ATEVEGRYQR RIEAILTPIV GMGNVHAQVT AQIDFSNREQ TDEQYQPNQT PNQAAVRSQQ
SSQSEQLGGR NIGGVPGALS NQPSATPTAP VTTPGNQTNQ NNASQTNAAN NASAGAQAGT
SASGLQSSNT RRDSTINYEV DRTIRHTKQS AGNVQRLSVA VVVNYALNSE GKAAALSEEQ
VKQIESLTRE TMGFSSDRGD TLNVVNAPFN EVTDGSGELP FWQKQAFLDL VTSIGKWLLV
LLVAWILWRK TVRPQMQKRA QQQALMEGLS AAKQEEDIVV QLSREEQEQQ RKSQQRVHAE
NQSQRIRDLA ESEPRVCALV IRQWMSTEL
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