Gene Dd703_1539 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDd703_1539 
Symbol 
ID8090132 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDickeya dadantii Ech703 
KingdomBacteria 
Replicon accessionNC_012880 
Strand
Start bp1821472 
End bp1821807 
Gene Length336 bp 
Protein Length111 aa 
Translation table11 
GC content46% 
IMG OID644835624 
Productflagellar hook-basal body complex subunit FliE 
Protein accessionYP_002987161 
Protein GI242238980 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1677] Flagellar hook-basal body protein 
TIGRFAM ID[TIGR00205] flagellar hook-basal body complex protein FliE 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.641952 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCAGTGC AAGGAATTGA ATCTGTTCTG CACCAACTGC AATCTGTAGC AACACAGGCG 
GCATCAACCA ACCTGTCCAG CACTTCCGTT GATACAAATG AAGTTGCGGC AGGTGTTGGT
TTCGCGCAAG AGATGAAATC CGCGCTGGAT AAAATCAGCC AACAGCAGGA AACGGCTAAA
ACTCAGGCTC AACAATATGA ATTGGGCGAA AAAGGCATCG CACTTAACGA TGTCATGGTT
GACTTGCAGA AAGCGTCATT ATCGTTGCAG ATGGGAGTTC AGGTTCGAAA TAAATTGGTA
TCCGCCTATC AGGAAATCAT GAACATGTCC GTCTGA
 
Protein sequence
MSVQGIESVL HQLQSVATQA ASTNLSSTSV DTNEVAAGVG FAQEMKSALD KISQQQETAK 
TQAQQYELGE KGIALNDVMV DLQKASLSLQ MGVQVRNKLV SAYQEIMNMS V