| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd703_1486 |
|---|
| Symbol | |
|---|
| ID | 8088214 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dickeya dadantii Ech703 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012880 |
|---|
| Strand | - |
|---|
| Start bp | 1756765 |
|---|
| End bp | 1757184 |
|---|
| Gene Length | 420 bp |
|---|
| Protein Length | 139 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 644835569 |
|---|
| Product | thioesterase superfamily protein |
|---|
| Protein accession | YP_002987108 |
|---|
| Protein GI | 242238927 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG2050] Uncharacterized protein, possibly involved in aromatic compounds catabolism |
|---|
| TIGRFAM ID | [TIGR00369] uncharacterized domain 1 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.63041 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATGATTT GGCAACGCGA TGTCTCGCTG GACAGCCTTA ATCACATGAG CCAAACCTGC
ATGCTGTCGC ATTTGGGGAT CGTCTTTACC CATATCGGAG AATCCTGCCT GGAAGCCACC
ATGCCGGTAG ACGATCGAAC CCGGCAACCG TTCGGTCTGC TGCACGGCGG GGCCTCCGTG
GTGTTGGCGG AATCGCTAGG GTCAGTCGCT GGCTGGTTGT GCACGCCGCC GGGCGCCAGC
GTAGTCGGCA GCGAAATCAA CGCCACCCAT CTGCGGGCGG TGAGCCAGGG CGAGGTACGG
GGGATCTGCC AGCCGTTGCA TCTGGGACAG CGCACACAGG TCTGGCAGAT TGAAATCGTC
GACCCACGGC AAACGCTTTG TTGCGTTTCG CGGTTGACCA CCACCGTCAT CCAGCCTTAA
|
|---|
| Protein sequence | MMIWQRDVSL DSLNHMSQTC MLSHLGIVFT HIGESCLEAT MPVDDRTRQP FGLLHGGASV
VLAESLGSVA GWLCTPPGAS VVGSEINATH LRAVSQGEVR GICQPLHLGQ RTQVWQIEIV
DPRQTLCCVS RLTTTVIQP
|
|---|
| |