| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd703_1477 |
|---|
| Symbol | |
|---|
| ID | 8088205 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dickeya dadantii Ech703 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012880 |
|---|
| Strand | + |
|---|
| Start bp | 1747534 |
|---|
| End bp | 1748571 |
|---|
| Gene Length | 1038 bp |
|---|
| Protein Length | 345 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 644835560 |
|---|
| Product | General secretion pathway protein K |
|---|
| Protein accession | YP_002987099 |
|---|
| Protein GI | 242238918 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG3156] Type II secretory pathway, component PulK |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.908273 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACCGTC GTCAGCGGGG GATGGCGTTA CTGATCGTGA TGTTGATGCT GGCGCTGATG
GTTACTGTGG CCGCATCCAT TGCTGAACGC AGCGGCAGGG CATGGCAGCG GACGGATCAC
TTGCTGAGCC GTACCCAGGC TAAATGGTAT GCCCTGGGCG CGGAGGCATT GATTGCCGGC
GTATTGGAGC GCGACGGCGC AGAATCGCCG GAGCATACGT TCATTGGGCA ATCCTGGTCG
CAAGTCGATC ATCAGGTGAT GGAGGATGGC TCGGAAATCC GGGGGCAAGT GGAAGATGGG
CAGGCGTGTT TGAACCTGAA CGCGCTGAAT CCGATAAAGA AAAAGCCGGC CTCCGGCACC
ACCACCAGCA GCACCGAAAC CAGTTCGGAA AGCAATGCGG CTCAGAGCAG CAACGGCGGA
ACGGAGCAGA CGCCTTACGC TGCACAGGTG TTGCGGCAGT TGATCATCAT GTTAGGCGAG
GATCCGGCGC GAGCTGATCG GGTGACTGAC TCGGTTCGTG ATTGGCTCGA TGAGGATAAC
GAGCCGCGGG AGCAGGGTGC GGAGGCCGAC AGTTATCCGA CCTTCCTGCC AGGGAACCAG
CCAATGACCG ACGTAACGGA ACTCAGAGCG GTAATGGGGA TGGATGCGTC GCTGTACCGC
CGACTGTTGC CCTATGTGTG TGTACTGCCG GTGGATAAGC TGGTTATCAA TGTCAACAGC
CTGACGCCTG ATCGTGCGTT GCTGCTTTCC GCGATGTTTA TGGGGCAGCT CAGTCCGGAT
AGCGCGGAAA AGATCCTACA ACAAAGGCCG CGGCAGGGGT GGGATAAAAT CAATGATTTC
ATGAGTATGT CGCAGATGCC GGAAGAGGGT AAATCCGGGG CGAATAAATC ACTGGCGCTC
AAAAGCGAAT GGTTTTTCGC CGACATTCAG GTACGGGTTG ATGATAGCGA GTTCTATCAG
CGCAGCCTGT TTCATCGGGG CAAACAGATC AACGTAATAC AACGGCAGTA CGGGGGATAT
AGGACGGTGA ACCCATGA
|
|---|
| Protein sequence | MNRRQRGMAL LIVMLMLALM VTVAASIAER SGRAWQRTDH LLSRTQAKWY ALGAEALIAG
VLERDGAESP EHTFIGQSWS QVDHQVMEDG SEIRGQVEDG QACLNLNALN PIKKKPASGT
TTSSTETSSE SNAAQSSNGG TEQTPYAAQV LRQLIIMLGE DPARADRVTD SVRDWLDEDN
EPREQGAEAD SYPTFLPGNQ PMTDVTELRA VMGMDASLYR RLLPYVCVLP VDKLVINVNS
LTPDRALLLS AMFMGQLSPD SAEKILQQRP RQGWDKINDF MSMSQMPEEG KSGANKSLAL
KSEWFFADIQ VRVDDSEFYQ RSLFHRGKQI NVIQRQYGGY RTVNP
|
|---|
| |