Gene Dd703_1474 details

Gene Information

• Locus tag: Dd703_1474
• ID: 8088202
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Dickeya dadantii Ech703
• Kingdom: Bacteria
• Replicon accession: NC_012880
• Strand: +
• Start bp: 1745895
• End bp: 1746434
• Gene Length: 540 bp
• Protein Length: 179 aa
• Translation table: 11
• GC content: 60%
• IMG OID: 644835557
• Product: general secretion pathway protein H
• Protein accession: YP_002987096
• Protein GI: 242238915
• TIGRFAM ID: [TIGR01708] general secretion pathway protein H; [TIGR02532] prepilin-type N-terminal cleavage/methylation domain

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGCGGCAAC GGGGATTCAC GCTGCTGGAA ATCATGCTGG TGGTGTTGCT GGCCGGCGTG 
GCCGCCACGT TGATCATGAT GGCGATCCCG ACGCCGAAAC GGCAGGACAG CGGCTGGCAG 
ATCGCCCGTT TTCAGGCGCA ACTGCAGTAT GCGGTGGAGG AGAGTCAGAT GAATGACCAA 
ATTTTGGGCA TTTATGTCCA ACCTCACCGC TGGCAATACG CGCTGCTACA ACGTCAGGTG 
GTTGAGAACT CGCCGGAAGA CCGGCAGCAG TTACGTTACC AGTGGCAACC CTGGCTGCCT 
TATCGACTGT CTCAGCCCAA CGAACTGCCC GCCAGCTTTG AGATGGAGCT GACGGTACAG 
GCCGGTGCGG CGGGTGATGG CGCGGGTTTT TCGCCGGGGA ACGGCGACCC CAACATTCTG 
ATTTTGCCCG GCGGTGAGGT GACGCCGTTC CGCTTGACGT TGCGTAACGG TAGCAGCACC 
GCCTGGCTAC AGGTGGATAC CAACGGTTTT CTAACAATGT CGCCGGACGC GAGGCAGTGA 

 

Protein sequence

MRQRGFTLLE IMLVVLLAGV AATLIMMAIP TPKRQDSGWQ IARFQAQLQY AVEESQMNDQ 
ILGIYVQPHR WQYALLQRQV VENSPEDRQQ LRYQWQPWLP YRLSQPNELP ASFEMELTVQ 
AGAAGDGAGF SPGNGDPNIL ILPGGEVTPF RLTLRNGSST AWLQVDTNGF LTMSPDARQ