Gene Dd703_1472 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDd703_1472 
Symbol 
ID8088200 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDickeya dadantii Ech703 
KingdomBacteria 
Replicon accessionNC_012880 
Strand
Start bp1744182 
End bp1745408 
Gene Length1227 bp 
Protein Length408 aa 
Translation table11 
GC content60% 
IMG OID644835555 
Productgeneral secretion pathway protein F 
Protein accessionYP_002987094 
Protein GI242238913 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1459] Type II secretory pathway, component PulF 
TIGRFAM ID[TIGR02120] general secretion pathway protein F 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.655662 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGCTGT TCCAGTATCA GGCATTGAAT GCACAAGGGA AAAAGTGCCA GGGCATGCAG 
GAGGCGGATT CCGCGCGCCT TGCCCGTCAA TTGCTGAGGG AAAAAGGGCT GATGCCGGTC
AACGTCGAGG AACAGCGCGG CGAAGCGGCG CTGCGTGGCA ACGGGTCATT CTCGTTACGT
CGGGCTCACC GAATCAGCGC CAGCGATTTG GCATTGTTGA CTCGGCAGTT GGCGACGCTG
GTTGCAGCGG CGCTGCCGCT GGAAGAGGCG CTGGATGCCG TGGCCAGACA GAGTGAAAAA
CCCAGGCTGC GGGCGCTGAT GGCGGCGGTG CGGGCTAAGG TGGTGGAAGG TCACTCGCTG
GCGGAGGCGA TGGGAAATTT CCCCAACAGC TTCGAACGCC TGTATTGCGC GATGGTAGCG
GCCGGCGAAG CGTCGGGCCA TCTGGATGCT GTGCTGAATC GTCTGGCGGA CTATACCGAA
CAACGCCAGC AGATGCGCAG CCGCATTCAA CAGGCCATGA TTTATCCCTG TGTCCTGACG
CTGGTGGCGG TGGCCGTCGT CAGTATTCTG CTCTCCGCCG TGGTGCCGAA AGTCGTCGAG
CAGTTCATCC ATATGAAGCA AGCATTGCCG TTATCGACCC GTCTGCTGAT GAGCGTCAGC
GATGCGGTGC GGACGTTTGG TCCCTGGGCG CTGCTGGCGT TGGTTTTGAC TATCATGGGC
GCGCGCGTGC TGTTAAGGGA AGAAAAGCGC CGGATTGTGT TTCATCGCCG TCTGTTATTT
CTCCCGGTGG TCGGCCGCAT CGCACGCGGG CTGAATACCG CCCGTTATGC CCGAACCCTC
AGTATTCTTA ATTCCAGCGC CGTCCCTCTG CTGCAAGCCA TGCGCATCAG CGGCGACGTG
CTGACCAACG ACTATGCCCG TTTCCGTTTG GGGCAGGCGA CCGACGCCGT GCGGGAAGGG
GTTAGCCTCA ATAAAGCGCT GGAGCAGACC GCGCTGTTTC CCCCGATGAT GCGGCACATG
ATTGCCAGCG GCGAACGCAG CGGCGAGCTT GACGACATGC TATCCCGCGC CGCGGATAAC
CAGGATCGCG AGTTCAGTGC CCAGATGACA TTGGCGCTCG GGCTGTTTGA GCCGCTGCTG
GTGGTGAGCA TGGCGGGCAT CGTGCTGTTT ATCGTACTGG CCATTCTTCA GCCGATTTTG
CAACTGAATA CCCTGATGAG CATGTAG
 
Protein sequence
MALFQYQALN AQGKKCQGMQ EADSARLARQ LLREKGLMPV NVEEQRGEAA LRGNGSFSLR 
RAHRISASDL ALLTRQLATL VAAALPLEEA LDAVARQSEK PRLRALMAAV RAKVVEGHSL
AEAMGNFPNS FERLYCAMVA AGEASGHLDA VLNRLADYTE QRQQMRSRIQ QAMIYPCVLT
LVAVAVVSIL LSAVVPKVVE QFIHMKQALP LSTRLLMSVS DAVRTFGPWA LLALVLTIMG
ARVLLREEKR RIVFHRRLLF LPVVGRIARG LNTARYARTL SILNSSAVPL LQAMRISGDV
LTNDYARFRL GQATDAVREG VSLNKALEQT ALFPPMMRHM IASGERSGEL DDMLSRAADN
QDREFSAQMT LALGLFEPLL VVSMAGIVLF IVLAILQPIL QLNTLMSM