Gene Dd703_1446 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDd703_1446 
Symbol 
ID8088171 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDickeya dadantii Ech703 
KingdomBacteria 
Replicon accessionNC_012880 
Strand
Start bp1713912 
End bp1715705 
Gene Length1794 bp 
Protein Length597 aa 
Translation table11 
GC content58% 
IMG OID644835527 
ProductABC transporter related 
Protein accessionYP_002987069 
Protein GI242238888 
COG category[R] General function prediction only 
COG ID[COG1123] ATPase components of various ABC-type transport systems, contain duplicated ATPase 
TIGRFAM ID[TIGR02323] phosphonate C-P lyase system protein PhnK 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGCCAGC CGGTACTTAG CGTGAAACAG CTCAATACAG CATTCCGGAC GCATGGTGAA 
TGGCGGCCGA TCGTGCGCGA TTTGTCTTTT GATATCGCGG CGGGAGAGAC GCTGGCGTTG
GTGGGGGAAT CCGGCTCGGG GAAAAGCGTT ACCGCGATGT CGATTATGCG CTTACTCGAT
TCTCAGGCTT GCATCAATGG TAGCGTGCGG TTTGAGGAGC AGGAGCTGTT GTCGCTCTCC
GCCGCCCAGA TGCAGCATAT CCGGGGAAAT CGTATCGGGA TGGTGTTTCA GGAGCCGATG
ACCAGCCTCA ATCCCGTGCT GACGATCGGG ACGCAGATTA CCGAAGTTTT GCGGCGTCAC
CGCGGCATGG ATCGCGCCAG CGCCCGGGCA GAAGCGGTGC GACTGCTGGA ACGTGTGCGG
ATCCCGGCTG CTCGTTCCAG GCTGGACGAA TACCCCATGA GTTTTTCCGG CGGCATGCGC
CAACGGGTAG TGATCGCCAT CGCGCTGGCG TGCAAACCCA GACTGTTGAT TGTCGACGAG
CCTACGACGG CGCTGGATGT GACGATTCAG GCGCAGATTT TGGCGCTGAT CAATGCGTTG
CAGGAAGAGG AGAATATGTC GATTCTGTTC ATTACCCACG ATATGGGGGT AGTGGCGGAA
GTCGCTGATC GCACGCTGGT GATGTATCGC GGTGAAGGTG TGGAGCTGGC TGAGACTCGG
CAACTTTTCC GGCAGCCCCA GCACCCTTAT AGTAAACGCC TGTTTTCCGC CGTACCGCGT
CTGGGCGCGA TGGCGGGCAT CCCGCTTCCC CAGCGTTTTG CGTTGTTCGA TGCGGCTGAG
CCTGCGGAAC AAATACCGCA AGTCGATACT GTCATTAATG GGGAGCCGAT CCTGTCGGTA
AAGAATCTGG TGATGCGGTT CGACGTGAAA TCCGGTTGGT TGAAACGGGT GACTGGCCGC
ATACATGCGG TGGAAGGCGT ATCTTTCGAT CTCTTTCCCG GAGAAACGTT ATCGCTGGTC
GGCGAGTCGG GCTGCGGTAA ATCTACCACC GGGCGCGCCA TTCTGCGGCT GACGTCTCCT
ACCTGCGGGC AGGTAACGAT TGGCGGGCGG GATATGTTGA TGGCGGATGC GCCGACGTTG
AAACGGCTGC GGACGCAAGC GCAAATGATA TTCCAGGATC CTTACGAGAG CCTGAATCCC
CGATTGCGGG TTGGAGACGC TATCGCCGAA CCTATGTTAA GCCACGGGTT GGTGAGTGCC
GGGCAGGCGC CCGCTCGTGT CGCCGAACTG CTGGAGAACG TCGGTCTTCG TGCCGATATG
GCGGAACGTT ATCCGCATCA GTTTTCCGGT GGACAACGGC AGCGGCTCTG TATCGCCCGC
GCACTGGCAT TGAATCCCCG CCTGATCATT GCCGATGAGT CGGTTTCCGC GTTGGATATG
ACCGTTAAAG CGCAAATCGT CAATCTGTTG CTCGATTTGC AGCAGCAGTA TGGGCTGGCC
TATCTGTTCA TCTCTCATGA TATGGCGGTG GTCGAGCGCA TCAGTCACCG TGTAGCCGTG
ATGTATCAGG GGGAAATCGT GGAGATTGGC TCACGCCAGT CTATTTTCTG TAATCCGCAG
CACCCTTATA CCCGGCGCTT GTTGTCGGCA GTCCCCGTCC CAGACCCTGA CATGAACATC
AAGCGATCGC TGATCCAGGA TGAGTTATCC AGCCCATTGC GTCCGGCAGA TTTCCAGCCG
CCACTACGCC ATTATCGGCA GGTGGAAGCC GGACATCTGG TAATGATGAA TTGA
 
Protein sequence
MSQPVLSVKQ LNTAFRTHGE WRPIVRDLSF DIAAGETLAL VGESGSGKSV TAMSIMRLLD 
SQACINGSVR FEEQELLSLS AAQMQHIRGN RIGMVFQEPM TSLNPVLTIG TQITEVLRRH
RGMDRASARA EAVRLLERVR IPAARSRLDE YPMSFSGGMR QRVVIAIALA CKPRLLIVDE
PTTALDVTIQ AQILALINAL QEEENMSILF ITHDMGVVAE VADRTLVMYR GEGVELAETR
QLFRQPQHPY SKRLFSAVPR LGAMAGIPLP QRFALFDAAE PAEQIPQVDT VINGEPILSV
KNLVMRFDVK SGWLKRVTGR IHAVEGVSFD LFPGETLSLV GESGCGKSTT GRAILRLTSP
TCGQVTIGGR DMLMADAPTL KRLRTQAQMI FQDPYESLNP RLRVGDAIAE PMLSHGLVSA
GQAPARVAEL LENVGLRADM AERYPHQFSG GQRQRLCIAR ALALNPRLII ADESVSALDM
TVKAQIVNLL LDLQQQYGLA YLFISHDMAV VERISHRVAV MYQGEIVEIG SRQSIFCNPQ
HPYTRRLLSA VPVPDPDMNI KRSLIQDELS SPLRPADFQP PLRHYRQVEA GHLVMMN