Gene Dd703_1405 details

Gene Information

• Locus tag: Dd703_1405
• ID: 8087967
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Dickeya dadantii Ech703
• Kingdom: Bacteria
• Replicon accession: NC_012880
• Strand: +
• Start bp: 1613485
• End bp: 1615362
• Gene Length: 1878 bp
• Protein Length: 625 aa
• Translation table: 11
• GC content: 61%
• IMG OID: 644835486
• Product: PTS system, beta-glucoside-specific IIABC subunit
• Protein accession: YP_002987029
• Protein GI: 242238848
• COG category: [G] Carbohydrate transport and metabolism
• COG ID: [COG1263] Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific
• TIGRFAM ID: [TIGR00830] PTS system, glucose subfamily, IIA component; [TIGR01995] PTS system, beta-glucoside-specific IIABC component

Plasmid Coverage information

• Num covering plasmid clones: 11
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAATACTC AATCTCTTGC CCGAGACCTA CTGAGGTTGG TGGGCGGCGA GGACAACGTC 
GCCACGCTGG TGCATTGCGC CACGCGCCTG CGGTTTACGT TGCGTACCGC CATCAGCCCA 
ATGGATGTGT GTGAGATCGA AGCGCTTGAC GGGGTCGTGA CCACCGTCAA CAGCGCCGGA 
CAGTTCCAGG TGGTGATCGG CAACCGCGTT CCCGAGGTGT ATCGGGCGTT CGGCGCTATT 
TCCGGCCTGT TGAATGATAG CCCCGGCGAC CGCAACACGG CGGGGACGTC AACCGGCAAC 
GGTTCCGTGC TGGGCAAATT GATCGACCTG GTGTCCTCGA TTTTTACGCC GTTGTTAGGC 
GCAATGGCGG CGGCCGGGGT GCTGAAAGGG GTATTGGCTA TCGTGCTGGC GCTGGGGTGG 
CTCAACGGCA AGGACAGCAC CTTCGTCATT CTGCATGCGG CTTCCGACAG CCTGTTCTAT 
TTCTTGCCGA TGTTGCTGGC CATCACCTCG GCACGCAAGT TTGACACCAA TATTTTCGTC 
GCGGTCTCGA TCGCCGGCGC GCTGGTCTAC CCGACCATCC AGGGGTTGTT CGACGCCGGC 
CGTGCGGTGA CATTCCTCGG CATGCCGGTG GTGATGATGA AATACACCTC GTCGGTGTTG 
CCGATCATTC TTGCCGTGTG GGTGATGTCC CACGCCGAGC GCTTTCTCAA CCGACGGATC 
CATGAAAGCG TGCGCAATAT TCTGACACCG TGCATGTTGC TGGTGGTTAT GGTGCCGCTG 
ACGCTGATGA CGATCGGGCC GGTAGGCATC AGCGTCAGTA AGCTGGTGGC CTCGGTATTC 
GTCACCATTT ATGAATTTAA CCCGATTCTG GCCAGCGCGC TGATTGCCGC GGCCTGGCAG 
ATTTTGGTGA TTTTCGGCGT GCACTGGGGG TTTGTCAGCG TGTTTATCAA CGATCTGTCG 
GTGATGGGCC GCAGTTTCCT TAAGGCATCG TCCAGCCCGT CGGTGTTTGC CCAGTCCGGC 
GCGTTGCTGG CGGTGATGCT GCGCACCCGG GATACCAAGC TGCGGGCGCT GGCGGGAAGT 
ACCTTCGTGG CGTCGTTGTT CGGCATCACC GAGCCGGGGG TCTACGGCGT CACGCTGAAA 
TTGAAAAAGC CGTTTATTTG CGCCGTGATT GCGGCGGCGA TTGGCGGCGG GGTGGTCGGG 
TATGCGAAGA GTTCGGCGAT TTCGATGGGC ATGCCGAGCC TGCTGACGCT GCCGATTTTC 
TACGGCGATG GGTTTATCGG TTTCGTGCTG GGGTGCGCCA TCGCGTTTGG GGTCAGCCTG 
GTGTTAACGC TGCTGGTGGG GTTTGAAGAC AGCAAACCGG CGGCGGAGAC GGCGGGCGAA 
CCCGCGATAA CGATGCAGCC GGCGCCGGCG CGCAAACGCG CCGCGGTGGC CGAGAATCTG 
GGCTTGCCGA TTCAGGGGGA AGTCATTCCG TTGAGCGCGG TGGATGACAA GGTGTTTTCC 
TCCGGTATCG TTGGGCCGGG CGTCGCTATC CGGCCGCAGG AAGGCTGCGT GTATTCGCCG 
CTGGAGGGCC AGGTGGTGAA TGTCTATGCC AGCGGACATG CGATTGGGCT GCGTTCCCGT 
TCCGGCGCCG AAGTGCTGGT TCACGTCGGC ATCGACACCG TGCAGTTGGA GGGTCGTCAT 
TATCGGATGA AGGTGGCGCA GGGTGAATGG GTCAGCCGAG GGCAGTTGTT GCTGGAGTTT 
GATCTCGCGG CGATAAAGGC CGCCGGTTAT GACACCACCA CGCCGGTCAT CGTTATCAAT 
GCCGACGATT ATCGCGCCGT TGACTACCCC ATGGCGCCGC AGCCGAAGGT CGGCGAAACC 
ATTATCGCGT TATCCTGA 

 

Protein sequence

MNTQSLARDL LRLVGGEDNV ATLVHCATRL RFTLRTAISP MDVCEIEALD GVVTTVNSAG 
QFQVVIGNRV PEVYRAFGAI SGLLNDSPGD RNTAGTSTGN GSVLGKLIDL VSSIFTPLLG 
AMAAAGVLKG VLAIVLALGW LNGKDSTFVI LHAASDSLFY FLPMLLAITS ARKFDTNIFV 
AVSIAGALVY PTIQGLFDAG RAVTFLGMPV VMMKYTSSVL PIILAVWVMS HAERFLNRRI 
HESVRNILTP CMLLVVMVPL TLMTIGPVGI SVSKLVASVF VTIYEFNPIL ASALIAAAWQ 
ILVIFGVHWG FVSVFINDLS VMGRSFLKAS SSPSVFAQSG ALLAVMLRTR DTKLRALAGS 
TFVASLFGIT EPGVYGVTLK LKKPFICAVI AAAIGGGVVG YAKSSAISMG MPSLLTLPIF 
YGDGFIGFVL GCAIAFGVSL VLTLLVGFED SKPAAETAGE PAITMQPAPA RKRAAVAENL 
GLPIQGEVIP LSAVDDKVFS SGIVGPGVAI RPQEGCVYSP LEGQVVNVYA SGHAIGLRSR 
SGAEVLVHVG IDTVQLEGRH YRMKVAQGEW VSRGQLLLEF DLAAIKAAGY DTTTPVIVIN 
ADDYRAVDYP MAPQPKVGET IIALS