Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dd703_1363 |
Symbol | |
ID | 8087925 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dickeya dadantii Ech703 |
Kingdom | Bacteria |
Replicon accession | NC_012880 |
Strand | - |
Start bp | 1561187 |
End bp | 1562644 |
Gene Length | 1458 bp |
Protein Length | 485 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 644835444 |
Product | putative sigma54 specific transcriptional regulator |
Protein accession | YP_002986987 |
Protein GI | 242238806 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG3829] Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.918013 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAATGG CAGAGATGAT AGAAAGCGAC ATTAACTACA AAGAGATCCT GGATAACCTG GAGTGTCCCA TCTATGTCAC CGATGCCAGG GGGATCACCC GTTATGTCAA CCGCGCCTAT ATTGCGGAGA ATCCCATGTG GGATCCGGAG CACCTTATCG GCCGCAACGT TCGGGACATC ATCAAAGAAG GGAAATGCTT CTCGCAAGCC ATCACCCCCA AGGTGTTGCA AGAGCGGCGG GAGGCGTTCG AATTGCTCAG CCACCCATTG CTGCCGGGGA AAAGCGCCTT TGTTTCCGGC CGTCCCATCT ACGACCAGCA CCGGGCCCTG AAACATGTGG TATCGATCCT CTATGTGGAC TCTTTTTTTC AGCGTCTGCA CACTCACTTT AACTACCCGT TGCGTCAGAT CTGCTCATTG GGGAAAGTCC CTTCCCAGGC CACGCTAACC GGCGATACGT TGCCGATCCC GCTGATCGGC CGCAGCGATA CCCTCAAGCG CATCCGAACA CTGTTAACCC GAATAGCGCC CACTAACGTA CCGGTGTTAA TCACCGGCGA ATCGGGCACC GGCAAAGAAG TGATCGCCAG CGCCATCCAA CGGTTCAGCG CGCGCGCCGA CAAGCCGTTT ATCAAGGTCA ACTGCGCCGC CATCCCGACC AGCCTGCTGG AAAGCGAGCT GTTCGGCTAC GACAAAGGCG CGTTCACCGG TGCGACCCCC CAGGGGAAGG CGGGCTTTTT TGAACAAGCC AACGGAGGGA CGCTGTTTCT CGACGAAATC GGCGAGCTGC CGTGGGAAGC GCAGGCCAAA CTCCTGCGCG TGCTGCAACA TCAGGAAATT CAGCGGCTGG GCAGCACTCG CAGCATCATG CTGGATGTGC GGATCATCGC CGCCACCAAC GCCAGCCTGC AGGAAAAAAT TCAGCAACGG CTGTTTCGCA GCGATCTCTA TTACCGGTTG AGCATCATCC CGCTGCATCT GCCGCCGCTG CGTGAGAGAC CTGAAGACAT CCCGTTGCTG ATCGAGTTTT TTTCCGGGGT GTTCGACCAG CAGTACCAGC GCATCATCCG CTTCGATGCA GACGGCATCG ACCGCCTGAA GCGCCATGTC TGGCCCGGCA ATGTGCGGGA GCTGCGCAAC TTTCTGGAGT ACATGTACAT CTGCGCCGAA GAAAATTTCG TCGATATCAC GACTATCGAA CACTGGTTGC TCGGCAACCG TACCGAGCAA CCGACGGACA CGTCGTCGCA GTGCCCCGCC AGCGAACTGG AGAGCTTCTG CCAGTCCATG CTGGAAATGG ACGTGCCGCT GAAAACCATT ATCGACGAGG TGGAACGGTG CGTGCTGCGC CAGTCGCTGG CGACTCACAA AACCACCTAC GCCGTGGCGA AAAAGCTGGG CGTGGCGCAA CCCACCATCG TGCGCAAACT CCACGGGCAC AACCTGCGCC CGGAATAA
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Protein sequence | MKMAEMIESD INYKEILDNL ECPIYVTDAR GITRYVNRAY IAENPMWDPE HLIGRNVRDI IKEGKCFSQA ITPKVLQERR EAFELLSHPL LPGKSAFVSG RPIYDQHRAL KHVVSILYVD SFFQRLHTHF NYPLRQICSL GKVPSQATLT GDTLPIPLIG RSDTLKRIRT LLTRIAPTNV PVLITGESGT GKEVIASAIQ RFSARADKPF IKVNCAAIPT SLLESELFGY DKGAFTGATP QGKAGFFEQA NGGTLFLDEI GELPWEAQAK LLRVLQHQEI QRLGSTRSIM LDVRIIAATN ASLQEKIQQR LFRSDLYYRL SIIPLHLPPL RERPEDIPLL IEFFSGVFDQ QYQRIIRFDA DGIDRLKRHV WPGNVRELRN FLEYMYICAE ENFVDITTIE HWLLGNRTEQ PTDTSSQCPA SELESFCQSM LEMDVPLKTI IDEVERCVLR QSLATHKTTY AVAKKLGVAQ PTIVRKLHGH NLRPE
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