Gene Dd703_1339 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDd703_1339 
Symbol 
ID8087901 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDickeya dadantii Ech703 
KingdomBacteria 
Replicon accessionNC_012880 
Strand
Start bp1530233 
End bp1530958 
Gene Length726 bp 
Protein Length241 aa 
Translation table11 
GC content59% 
IMG OID644835420 
Productputative periplasmic ligand-binding sensor protein 
Protein accessionYP_002986963 
Protein GI242238782 
COG category[S] Function unknown 
COG ID[COG3416] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.133889 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAATCTG AAGAACAACG CCTTATTGAT GGTCTGTTTA GCCGCCTGAA AGACGCCGAG 
ACCAAAACGG GGCCGCGGGA TCTCAAGGCA GAACAGCAAA TTAGCGACCA CATCCGCCAA
CAGCCCGCCG CACCTTATTA CATGGCGCAG GCAATGATTA TTCAGGAAGC GGCGCTGAAG
CAGTTGGATC AGCGGGTCAG AGAGCTGGAA AACGAAGTCA ATCGGCTAAG GCAGGAAGCC
GCCCGCCCGC AACAAAGCAG CGGCGGTTTT CTTGCCGGGC TGTTCGGCGG CGGTCGCACC
GCCGCACCGG CCCCGCAGCA GTATCAGCAA CCGGTCAACA ACGGCTGGGG CAACCAACCC
GCACCGGGAT ACGGCGCGCA GCCAGGATAT AGTGCTCAAC CGGGATATGC CCAACCGGCG
CCGAGCCGGG CCGGCGGTTT CCTGGGCGGC GCGTTGCAAA CTGCGGCAGG CGTTGCCGGC
GGCGTGGTAC TGGCGGATAT GCTGACCAGC ATGTTCCACA GTTCCAAACC GCAGGAAATC
GTCAACATTA TTGAGGAAAC ACCGCAAAAC CTCAGCGACG GTTTACAGAA CACCGGCATG
GAAAGGCTCG ACGCCTTCGG TTCGGACAAC GGCAGCGATT TTCTCAACGC CGGTTACGAT
TCGCAGGACA GCGGTTTTGA TGCATTCGGC AGCGACAGTT ACGACGACGA CGATTCCTAC
CTGTAA
 
Protein sequence
MQSEEQRLID GLFSRLKDAE TKTGPRDLKA EQQISDHIRQ QPAAPYYMAQ AMIIQEAALK 
QLDQRVRELE NEVNRLRQEA ARPQQSSGGF LAGLFGGGRT AAPAPQQYQQ PVNNGWGNQP
APGYGAQPGY SAQPGYAQPA PSRAGGFLGG ALQTAAGVAG GVVLADMLTS MFHSSKPQEI
VNIIEETPQN LSDGLQNTGM ERLDAFGSDN GSDFLNAGYD SQDSGFDAFG SDSYDDDDSY
L