| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd703_1322 |
|---|
| Symbol | |
|---|
| ID | 8087884 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dickeya dadantii Ech703 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012880 |
|---|
| Strand | + |
|---|
| Start bp | 1509408 |
|---|
| End bp | 1510310 |
|---|
| Gene Length | 903 bp |
|---|
| Protein Length | 300 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 644835403 |
|---|
| Product | phosphonate ABC transporter, inner membrane subunit |
|---|
| Protein accession | YP_002986946 |
|---|
| Protein GI | 242238765 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG3639] ABC-type phosphate/phosphonate transport system, permease component |
|---|
| TIGRFAM ID | [TIGR01097] phosphonate ABC transporter, permease protein PhnE |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCATGA GGCCTATGTT CTCAGCGGGT AATGATACGG CGGTGCTGCG CAAGCAACAC
GCTGAACTGT TCTCCCTGCA GCGGCGCTAT CTGTGGCGCA TTGGCATGCT GGCGTTGGCG
ATGGTCGTCT ACTACCTGTG GTTTTTGTCG ACGTTCGGCA TCACGCTGGC GCAGTGGGGG
CACGGCGTGG GCGAGCTGGG CCGCTATTTT CTGCGGATGT TCGTCTGGCA CGATTTCCTC
GACTGGCCGT TCGGCTACTA CCTGTCGCAG GTATTTATCA CGATCGCCAT CGTATTCGCC
GGGACGCTGA CGGCGACGTT CGTCGCACTG CCGCTGTCGT TTCTGGCGGC GCGTAATGTG
ATGCACGAAC CGTGGCAGCG CCCGGTGGCG TTGCTGGTGC GGCGGCTGCT GGACGTGCTA
CGCGGCATCG ATATGGCGAT CTGGGGGCTG ATTTTCGTGC GGGCGGTGGG CATGGGGCCG
TTGTCCGGCG CGCTGGCGAT CCTGATGCAG GATACCGGCC TGCTCGGCAA ACTGTACGCC
GAAGGGCACG AAGCGGTGGA GCGCGCGCCC AGTCGCGGGT TGGGTGCGGT CGGCGCCAAC
AGTTGGCAGA AGCACCGTTT CGGCATTTTC ACCCAATCAT TCCCGGCGTT TCTGGCGCTC
AGTCTGTACC AGATGGAATC GAACGTGCGT TCGGCGGCGG TGTTGGGGTT TGTCGGCGCG
GGCGGCGTCG GCCTGGTCTA TGCCGAAAAC ATGCGGTTAT GGAACTGGGA TGTGGTGATG
TTCATCACCT TGATTCTGGT GGTGGTGGTG ATGGCGATGG ATGTGCTCTC CGCACGCCTG
CGCCAACGCT ATATCACCGG CAAACCGGTG CCGTTGTTTG AATCACAACC ATCGCCACGT
TGA
|
|---|
| Protein sequence | MTMRPMFSAG NDTAVLRKQH AELFSLQRRY LWRIGMLALA MVVYYLWFLS TFGITLAQWG
HGVGELGRYF LRMFVWHDFL DWPFGYYLSQ VFITIAIVFA GTLTATFVAL PLSFLAARNV
MHEPWQRPVA LLVRRLLDVL RGIDMAIWGL IFVRAVGMGP LSGALAILMQ DTGLLGKLYA
EGHEAVERAP SRGLGAVGAN SWQKHRFGIF TQSFPAFLAL SLYQMESNVR SAAVLGFVGA
GGVGLVYAEN MRLWNWDVVM FITLILVVVV MAMDVLSARL RQRYITGKPV PLFESQPSPR
|
|---|
| |