| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd703_1280 |
|---|
| Symbol | |
|---|
| ID | 8087842 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dickeya dadantii Ech703 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012880 |
|---|
| Strand | - |
|---|
| Start bp | 1462017 |
|---|
| End bp | 1463744 |
|---|
| Gene Length | 1728 bp |
|---|
| Protein Length | 575 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 644835361 |
|---|
| Product | NADH dehydrogenase (ubiquinone) 30 kDa subunit |
|---|
| Protein accession | YP_002986904 |
|---|
| Protein GI | 242238723 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG3261] Ni,Fe-hydrogenase III large subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.637418 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGATTAATC AAACCCCCGC GCAAAACGCC GATGCCTTGG GCGCGAGCTA TGTGGCTCAG
GTAAGAGCGA AATTCCCCAC GGCGATCCTG GAGGAAGAGC GACAGACCAG CAATCAGCTG
ACGATTACCG TGAAGCTGCA TACGCTGCCG GAAGTGGTGG AATACCTCTA TTACCAGCAC
GGCGGCTGGC TGTCGGTGCT GTTCGGCAAC GACGAACGCT CCCTTAACGG CCATTTTGCC
GTCTACTATG TGTTGTCGAT GGAACAGGGC GAGAAGTGCT GGGTGGTGGT GAAGGCGCTG
GTTAACCCGA CGGTGCCGGA ATTCCCCTCG GTCACGCCGC GCGTGCCCGC CGCCGTGTGG
GGCGAGCGCG AAGTGCGCGA CATGTACGGG CTGATCCCGG TCGGCCTGCC GGATGAGCGT
CGCCTGGTGC TGCCGGACGA CTGGCCGGAC GAACTCTACC CGCTGCGCAA GGACGCGATG
GATTACCGTC AGCGCCCTGC GCCCACCCGT GACGACGAGT CCTACACCTT CGTCAACGAA
GCCACCGGCG ATACCCGCGT GGTGCCGATC GGCCCGATGC ATATTACCTC CGACGAACCG
GGCCACTTCC GGCTGTTCGT CGACGGCGAG CAGATCATCG ACGCCGACTA TCGCCTGTTC
TACGTCCACC GCGGCATGGA AAAACTGGCG GAAACCCGCA TGGGCTACAA CGAAGTGACA
TTCCTGTCCG ACCGGGTGTG CGGCATCTGC GGTTTCACCC ACAGCGTGGC CTACACCTCG
TCCATCGAGA ACGCGCTCGG CGTCGTGGTG CCGGCCCGCG CCCATACCAT CCGCAGCATT
TTGCTGGAAG TGGAGCGCCT GCACAGCCAC CTGCTCAATA TCGGGCTGTC GAGCCACTTT
GTCGGCTTCG ATACCGGCTT TATGCAGTTC TTCCGGGTGC GCGAAAAATC GATGCAAATT
GCCGAGATGC TCACCGGTGC GCGCAAGACC TATGGGCTGA ACCTGATCGG CGGTATTCGT
CGCGACATTC TGAAAGAAGA CCGGCTGAAG ACCATCAAGC TGATCCGCGA AATGCGCGAA
GAGGTCACTC AACTGACCGA TATGTTGCTC AACACCGCCA ATATGGCGCA ACGCACCCAA
GGCATCGGCG TGCTGAACCG GCAGGTGGCG CGCGATTACA GCCCGGTGGG GCCGATGATC
CGCGCCAGCG GGTTTAACCG CGACGTGCGC GTCGACCATC CGTTCGCCGG CTATCTCGAC
CTGCCGATGG AGTTGCACCA CCTCGATGGC GGCGACGTGT ATTCCCGCGT GTTGGTACGG
GTGCGCGAAG TCTTTACCTC GCTGGCGATG ATCGAATTCG GGCTGGACAA CATGCCCGGC
GGGCCGATCC TCAACGAGCA TATCCACTAC CGGCCGCACA AGTTCGCACT GGGCTTTACC
GAAGCGCCGC GCGGCGAGGA TATCCACTGG AGTATGACCG GCGACAACCA GAAGCTGTTC
CGCTGGCGCT GCCGCGCCGC CACCTACGCC AACTGGCCGG TGCTGCGCTT TATGCTACGC
GGCAACACGG TATCGGACGC GCCGCTGATC ATCGGCAGCC TCGACCCGTG CTACTCCTGT
ACCGACCGTG TCACGCTGGT GGATGTACGC AAAGAGAAGA TCACCACCGT GCCGTACAAA
GAATTGGAAC GCTACGGACT GGAACGTACC CGTTCGCCGC TGAAATGA
|
|---|
| Protein sequence | MINQTPAQNA DALGASYVAQ VRAKFPTAIL EEERQTSNQL TITVKLHTLP EVVEYLYYQH
GGWLSVLFGN DERSLNGHFA VYYVLSMEQG EKCWVVVKAL VNPTVPEFPS VTPRVPAAVW
GEREVRDMYG LIPVGLPDER RLVLPDDWPD ELYPLRKDAM DYRQRPAPTR DDESYTFVNE
ATGDTRVVPI GPMHITSDEP GHFRLFVDGE QIIDADYRLF YVHRGMEKLA ETRMGYNEVT
FLSDRVCGIC GFTHSVAYTS SIENALGVVV PARAHTIRSI LLEVERLHSH LLNIGLSSHF
VGFDTGFMQF FRVREKSMQI AEMLTGARKT YGLNLIGGIR RDILKEDRLK TIKLIREMRE
EVTQLTDMLL NTANMAQRTQ GIGVLNRQVA RDYSPVGPMI RASGFNRDVR VDHPFAGYLD
LPMELHHLDG GDVYSRVLVR VREVFTSLAM IEFGLDNMPG GPILNEHIHY RPHKFALGFT
EAPRGEDIHW SMTGDNQKLF RWRCRAATYA NWPVLRFMLR GNTVSDAPLI IGSLDPCYSC
TDRVTLVDVR KEKITTVPYK ELERYGLERT RSPLK
|
|---|
| |