| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd703_1268 |
|---|
| Symbol | |
|---|
| ID | 8087830 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dickeya dadantii Ech703 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012880 |
|---|
| Strand | - |
|---|
| Start bp | 1450903 |
|---|
| End bp | 1453053 |
|---|
| Gene Length | 2151 bp |
|---|
| Protein Length | 716 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 644835349 |
|---|
| Product | formate dehydrogenase, alpha subunit |
|---|
| Protein accession | YP_002986892 |
|---|
| Protein GI | 242238711 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3383] Uncharacterized anaerobic dehydrogenase |
|---|
| TIGRFAM ID | [TIGR01591] formate dehydrogenase, alpha subunit, archaeal-type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.424555 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAGAAAG TGATTACCGT CTGCCCCTAC TGCGGGTCAG GCTGCAAAAT TAACCTGTTG
GTGGAAAATG GCAAAGTGGT TGGCGCCGAA GGGGCCAACG GTCTCACCAA CGAAGGTGAG
CTGTGCCTGA AAGGCTATTA CGGCTGGGAT TTCCTCAATG ACACCAAGTT ACTGACCCCG
CGTCTGAAAC AGCCGATGAT CCGCCGCCAG AAAGGCGCGC CGTTTGAAGT GGTGTCCTGG
GACGAGGCCA TCGAGTTCGC CAGTTCCCGT TTGAAAGCCA TCAAGGAAAA ATACGGCCCG
GACGCCATCA TGCACACCGG CTCTTCTCGT GGCCCGGGCA ACGAAACCAA TTTCGTCATG
CAGAAATTCG CCCGCGCCGT CACCGGCACC AACAATATCG ACTGCTGTGC TCGCGTATGT
CACGGCCCGT CGGTATCCGG TTTGCAGGTC ACGCTGGGCA ACGGCGCGAT GAGTAACTCG
ATTTGCGAAA TCGAAAAAAC CGACTGCATT CTGGTGTTCG GCTACAACGC CGCCGACTCC
CACCCGATCG TGGCGCGCCG CATCATCAAA GCGAAAGAAC GCGGCGCCAA GATCATCGTC
TGCGACCCGC GTCACATTGA AACCGCCCGC ATCGCCGATC TGTGGTTGCC GCTGAAAAAC
GGCTCCAACA TGGCGCTGGT GAACGCCTTC GCCAACGTGC TGATCAACGA AGGGTTGTAC
AACCAGAGCT TTGTGTCTGC GCACACCGAA GGGTTCGAGG AATACCGCAA TCTGGTGGCG
AAATACACGC CGGAATATGT GGCGGACATC ACCGGCCTCA GTCCGCAATT GATCCGTGAA
GCCATCCGTA TGTATGCCGC TGCGCCGTCC GCCACCATTC TGTGGGGCAT GGGCGTAACC
CAGTGGACGC AAGGGGTCGA CGTGGTGAAA GGCCTGTCCG GCCTGGCGCT GCTGACCGGC
AACCTCGGCC GCCCGAACGT GGGCGTCGGC CCGGTGCGCG GTCAAAACAA CGTGCAAGGT
GCCTGCGATA TGGGCGCGTT GCCGAACCAA TTCCCCGGCT ATCAGAAAGT CACCGACCCG
GAAATCCGTG AGAAATTCGC CAAAGCCTGG GGCGTGCCGT CGTTGTCTGA CCGCATCGGT
TACTCGCTGA CCGACGTACC GCACATGATC AAGGAAGGCA AGATCAAGGC CAACTACCTG
ATGGGCGAAG ACCCGTTGCA GACCGAGCCG GACCTGTCGG TAGTACGGCA GACCTTCGCC
GAACTGGAAT TGTTGATCGT TCAGGATATT TTCATGACCA AAACCGCCGC GATGGCGGAT
GTGATCTTCC CGGCGACGTC CTGGGGCGAA CACGAAGGGG TTTATTCGGC GGCCGACCGT
GGCTTCCAGC GCTTCTATAA AGCGGTGGAA CCGCAGGGCA ACGTCAAGCC GGATTGGGAA
ATCATCAGCC TGATGGCTAC CGCCATGGGC TACCCGATGC ACTACAACAA CACCCAGGAA
ATCTGGGATG AGCTGCGCCA TTTGTGCCCA CTGTACTACG GTGCGACCTA CGACAAGATG
GCCGGGCTGG GCTATATTCC CTGGCCGTGT CTGACCGAAG ACAGCCCAGG AACACCGTGG
CTGTATGCCG GCAACAAGTT CGACCGCCCC AACGGCAAAG GGCTGTTGTT CGCCACCGAA
TGGCACCCGC CGATGGAGCA GACCGACGCC GAGTATCCGC TGGTGCTCTC CACCGTGCGT
GAAGTGGGTC ACTACTCCTG CCGTTCCATG ACCGGCAACT GTACCGCGTT GCAGACGCTG
GCCGACGAAC CCGGCTATGT GCAGATGAAC CCGGAAGACG CCGCCGCTCT CGGCGTGCGC
GACCAGCAGT TGGTGTGGGT CGCTTCCCGC CGCGGCAAAG TGATCAGTCG CGCCATGGTC
AGCGAACGCA TTAACAAAGG GGCGGTATAC ATGACCTACC AGTGGTGGAT CGGCGCCTGT
AACGAACTGA CGCTGGATGA AGTGGATCCG ATCTCCAAAA CACCGGAGTA CAAACACTGT
GCCGTGAAAC TGGAGGCTAT CGCCGATCAG AACTGGGCGG AAAACTATGT CGTTCAGGAA
TACAGCGCAC TGAAGGCGCG TCTGCGTAAA GAAGCGGAAG TCGCGGGTTA A
|
|---|
| Protein sequence | MQKVITVCPY CGSGCKINLL VENGKVVGAE GANGLTNEGE LCLKGYYGWD FLNDTKLLTP
RLKQPMIRRQ KGAPFEVVSW DEAIEFASSR LKAIKEKYGP DAIMHTGSSR GPGNETNFVM
QKFARAVTGT NNIDCCARVC HGPSVSGLQV TLGNGAMSNS ICEIEKTDCI LVFGYNAADS
HPIVARRIIK AKERGAKIIV CDPRHIETAR IADLWLPLKN GSNMALVNAF ANVLINEGLY
NQSFVSAHTE GFEEYRNLVA KYTPEYVADI TGLSPQLIRE AIRMYAAAPS ATILWGMGVT
QWTQGVDVVK GLSGLALLTG NLGRPNVGVG PVRGQNNVQG ACDMGALPNQ FPGYQKVTDP
EIREKFAKAW GVPSLSDRIG YSLTDVPHMI KEGKIKANYL MGEDPLQTEP DLSVVRQTFA
ELELLIVQDI FMTKTAAMAD VIFPATSWGE HEGVYSAADR GFQRFYKAVE PQGNVKPDWE
IISLMATAMG YPMHYNNTQE IWDELRHLCP LYYGATYDKM AGLGYIPWPC LTEDSPGTPW
LYAGNKFDRP NGKGLLFATE WHPPMEQTDA EYPLVLSTVR EVGHYSCRSM TGNCTALQTL
ADEPGYVQMN PEDAAALGVR DQQLVWVASR RGKVISRAMV SERINKGAVY MTYQWWIGAC
NELTLDEVDP ISKTPEYKHC AVKLEAIADQ NWAENYVVQE YSALKARLRK EAEVAG
|
|---|
| |