Gene Dd703_1240 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDd703_1240 
Symbol 
ID8087801 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDickeya dadantii Ech703 
KingdomBacteria 
Replicon accessionNC_012880 
Strand
Start bp1422703 
End bp1423602 
Gene Length900 bp 
Protein Length299 aa 
Translation table11 
GC content65% 
IMG OID644835322 
Productmalonate decarboxylase, epsilon subunit 
Protein accessionYP_002986866 
Protein GI242238685 
COG category[I] Lipid transport and metabolism 
COG ID[COG0331] (acyl-carrier-protein) S-malonyltransferase 
TIGRFAM ID[TIGR03131] malonate decarboxylase, epsilon subunit 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.306297 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAATTC TGTTTACGTT TCCCGGTCAG GGAACACAGT ACCCCGGGAT GTTGCACACC 
TTACCGCACG GAGACGTGCT TGAGGCCGCG CGCGCCGTTC TGGGCGCAGA AGCGGAAACG
CTCGATTCGC CGCAAGCGCT GCGCCACACC CGCGCCGTGC AGCTGTGCCT GTTAATCGCC
GGCGTCGCCT GGGCGCGGGA ACTACAACAG CACGGCGTCC ATCCCGATAT CGTCAGCGGC
TTATCCATCG GCGCCTACCC GGCGGCCGTG ATCGCCGGGG CGCTGGATTT CACCGACGCG
CTGCGTCTGG TCGCCCTGCG CGGCGATTTG ATGGAACAGG CGTATCCGCA CGGCTACGGC
CTGACGGCCA TCATGGGGCT GACCCGCGAT CGCGTCGAAG CGCTGATCGC CGACAGCGAC
GTTTATCTCG CCAACCTGAA TGCAGAAACG CAAATAGTGA TTGCCGGCAG CGATGAGGCG
ATGGCGGCGG TGGCCCAAAA AGCGCTGGCG GCGGGCGCCG GCAAAGCGCA GCGGTTGGCC
GTCAGCGTAC CGTCCCACTG CGCGCTGCTG GATAAACCCG CCGCCGAACT GGCGCAGGCG
TTTTCCACCG TGATGTTGGC TCGCCCACGC TGCGCCTATC TGAGCGGCAG CACCGGCCGC
GTACTGTGGG ATCCGGCGCG GATTGCCGAC GATCTGGCAT TCAATATGGC GCGAACGGTG
CAATGGCAAG ACGCCATGGT GTCGGCGAAC CAGCGCGATG CCCGCTTGGC GATTGAAATG
CCGCCCGGCG GCGTGCTGAC CTGCTTGACG CGGCAGGCCG CCTGGCAAGG AGAGTGTCTT
TCGCTAGAGC GCAGCGGCAT CGACGTGGCG CGCCATCTGG CGCAGGTGTT CAGGCAGTGA
 
Protein sequence
MKILFTFPGQ GTQYPGMLHT LPHGDVLEAA RAVLGAEAET LDSPQALRHT RAVQLCLLIA 
GVAWARELQQ HGVHPDIVSG LSIGAYPAAV IAGALDFTDA LRLVALRGDL MEQAYPHGYG
LTAIMGLTRD RVEALIADSD VYLANLNAET QIVIAGSDEA MAAVAQKALA AGAGKAQRLA
VSVPSHCALL DKPAAELAQA FSTVMLARPR CAYLSGSTGR VLWDPARIAD DLAFNMARTV
QWQDAMVSAN QRDARLAIEM PPGGVLTCLT RQAAWQGECL SLERSGIDVA RHLAQVFRQ