Gene Dd703_1237 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDd703_1237 
Symbol 
ID8087798 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDickeya dadantii Ech703 
KingdomBacteria 
Replicon accessionNC_012880 
Strand
Start bp1420438 
End bp1420854 
Gene Length417 bp 
Protein Length138 aa 
Translation table11 
GC content60% 
IMG OID644835319 
ProductLrgA family protein 
Protein accessionYP_002986863 
Protein GI242238682 
COG category[R] General function prediction only 
COG ID[COG1380] Putative effector of murein hydrolase LrgA 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.783024 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGTATAT CCATCAATGG TTTCTGGCAT CAGGCCCGGG CGTTCATCCT GATTTACGCC 
TGTCTGTACC TCGGCAGCGG CATTGCCGCC CTCCTTCCCA TCAGCATCCC GGGAAGCATC
ATCGGCATGC TGATCCTGTT TTTGCTGCTC GCCACCCAGT GGGTACCGGT GCCGTGGGCC
AAACCGGGGT GTCACATACT GATTCGCTAT ATGGCGCTGC TGTTTGTCCC GATTGGCGTC
GGCGTGATGC AGTACGCCGA CCTGCTGCGT ACCCAGTTCG GGCCGGTGGT GATCTCCTGC
ACCGTCAGTA CGCTGATCGT GCTCGTCACG GTAAGCGGGT GCTCACACCT CGTTCATGGC
CGCACGTCAT CCCGGCAGCC GACCCAACCC AAGAAAGGAG CCGATCATGT GGCATGA
 
Protein sequence
MRISINGFWH QARAFILIYA CLYLGSGIAA LLPISIPGSI IGMLILFLLL ATQWVPVPWA 
KPGCHILIRY MALLFVPIGV GVMQYADLLR TQFGPVVISC TVSTLIVLVT VSGCSHLVHG
RTSSRQPTQP KKGADHVA