Gene Dd703_1228 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDd703_1228 
Symbol 
ID8087789 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDickeya dadantii Ech703 
KingdomBacteria 
Replicon accessionNC_012880 
Strand
Start bp1409670 
End bp1411142 
Gene Length1473 bp 
Protein Length490 aa 
Translation table11 
GC content53% 
IMG OID644835310 
Productdiguanylate cyclase 
Protein accessionYP_002986854 
Protein GI242238673 
COG category[T] Signal transduction mechanisms 
COG ID[COG2199] FOG: GGDEF domain 
TIGRFAM ID[TIGR00254] diguanylate cyclase (GGDEF) domain 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGTCCTTTT CTCAAACTTC CCAGATCTAT TGGATGAATA GAAAACGGGC CGCCATCCTG 
TTTTCCTGTA TGTTGCTAAG CGCATTTCTG GTGATCAGTT GGAGCAGTTA TCAGGTCGCC
CGCCACTCGC TATTCGACGA GATTTCAGAA AACTCGCTGC CGCTCACCAG CGACAATATC
TACTCCGAAA TCCAACGCGA CCTGCTCAAT CCTATTTTCA TTTCATCGTT GATGGCGCAC
GACACCTTCG TCAAAGACTG GGTGCTGGCG AATGAAACGG ATCCACAAGC GATGATTCGC
TATCTCAGAG AGATAGACCG CCGCTTTAAC ACGGTGGTTT CCTTTTTTGT TTCCAATAAC
ACCCGCCGCT ATTACGACCC GGACCGGATA AACCACACGC TTTCCGAGCA ATCACCGGAA
GACCAGTGGT TTTTCGACAT CAGGAATGCG CAAAGTAGCG ACCCTTACGA CATTGAAATC
CATACCGATC CGGAAAATCG CACCCGGGTG GATATTTTCA TCAACTACAA GGTGTTCGAC
TACAACGGTA ATTTTATCGG CGTCACCGGC GTCGGCCTGC CGGTACAGCG GGTGACTCAA
CTGATTGAAA CTTACGAACA ACGCTACAAC CGCACCATCT ACTTTATCGG TGAAAACGGC
GATGTCATGC TGCACAGTAA AACATTTCGC CGCGAACTGA ACATTCATCG TCAACCGGGA
TTACAGCAGC TGGCGACCCA AATCCTGACG GCGCCCGGCG GTAACTATCA GTACCGCTTG
AACGATGACA ATATCTTTCT GAACACCCGC ATTATTCCGG AGTTTGGCTG GAAACTGATG
GTGGAACAAA ATAGCAATCC GCACGACCAG CGATTGTGGT TCATGCTGCT GAAAAACACC
GGCCTCAGTA TTCTGGTCAG CGTCACCATG CTGATATTGA TCTGGTTAAC CATCGGCGCC
TACCAGCGGC GGCTTGAGCT GATGGCGACC ACCGATAAAC TGACCGGCTT GATGAACCGA
CAGGCATTTG AATACATCGT CCGGACGCTG CGCATGAAGC AATCGGCGCA GCACCACACC
TTTTCCCTCA TTCTGATTGA TTTGGATCAC TTCAAAAAAA TCAACGATAA GTACGGGCAC
AACATCGGCG ATCGGGTGCT GGTGCGCGCC GCCTCGCTGA TAAAACGCGC GATTCGCAAA
ACGGACTTCG CCTGCCGCTG GGGCGGCGAA GAATTCGTGG TACTGCTGGG GGAGTGCTCG
CTGCATCAGG CTCATCAAAT CGCCGAGAAG ATACGTCAGG CCGTCCGTTT TGCGCTGGTA
TCGCACCGGC ATCAGGTCAT CGACCTCACC CTCAGTTGCG GCGTGGCGGA ATCCCATTCG
GGCGAGAGCC TCGACCATCT GGTACAGCGC GCCGACAAAG CGCTGTACCA GGCCAAGCGC
CAGGGGCGAG ATCGGGCGGT CATGGCGGAC TAA
 
Protein sequence
MSFSQTSQIY WMNRKRAAIL FSCMLLSAFL VISWSSYQVA RHSLFDEISE NSLPLTSDNI 
YSEIQRDLLN PIFISSLMAH DTFVKDWVLA NETDPQAMIR YLREIDRRFN TVVSFFVSNN
TRRYYDPDRI NHTLSEQSPE DQWFFDIRNA QSSDPYDIEI HTDPENRTRV DIFINYKVFD
YNGNFIGVTG VGLPVQRVTQ LIETYEQRYN RTIYFIGENG DVMLHSKTFR RELNIHRQPG
LQQLATQILT APGGNYQYRL NDDNIFLNTR IIPEFGWKLM VEQNSNPHDQ RLWFMLLKNT
GLSILVSVTM LILIWLTIGA YQRRLELMAT TDKLTGLMNR QAFEYIVRTL RMKQSAQHHT
FSLILIDLDH FKKINDKYGH NIGDRVLVRA ASLIKRAIRK TDFACRWGGE EFVVLLGECS
LHQAHQIAEK IRQAVRFALV SHRHQVIDLT LSCGVAESHS GESLDHLVQR ADKALYQAKR
QGRDRAVMAD