Gene Dd703_1219 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDd703_1219 
Symbol 
ID8087780 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDickeya dadantii Ech703 
KingdomBacteria 
Replicon accessionNC_012880 
Strand
Start bp1395708 
End bp1396724 
Gene Length1017 bp 
Protein Length338 aa 
Translation table11 
GC content61% 
IMG OID644835301 
ProductMandelate racemase/muconate lactonizing protein 
Protein accessionYP_002986845 
Protein GI242238664 
COG category[M] Cell wall/membrane/envelope biogenesis
[R] General function prediction only 
COG ID[COG4948] L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGGAAC TGATTTTCAC CCACGAAAGT TGGGCCCTGC GGGAAACGTT CACCATATCG 
CGCGGCAGCA AAACCCATGC GGAGGTGATT AAAGTCACCC TGAGCGACGG CAATCACGTC
GGACATGGCG AAAGCGTTCC CTATGCCCGG TATGGCGAAA ACATCAGCAA TGTTGAAGCT
CAATTGCACA GCGTAGCCGA CGCGATACGA CAAGGGATGA CGCGAGAAAC TTTGCAGGAC
GCGCTGCCCC CGGGCGCCGC ACGCAATGCG CTGGACTGCG CCTACTGGGA TTTGGCCAGT
CGGCAGCAGG GCAAACCGGT GTGGCAGTTG GCCGGATTAC CGCGCCCGAC GCCGCTCGTC
AGCGCTTATA CGCTGTCGCT GGACACCCCG GAGCGTATGG CGCAATCCGC ACAACGCAAT
GCTTACCGCC CATTGCTCAA ACTCAAGCTG GCGGACGAAC AGGATATCGA TCGCGTAGCC
GCTGTACGCC GCTGGGCGCC TGAATCGCGG TTGATCGTCG ACGCCAACGA AGGTTGGGAC
GCCGCACTTT ATCAGAGACT GGTACCGGAA CTGCTGCGGC TGGGCGTCGC CATGATTGAA
CAGCCGCTAC CCGCCCGCGA AGATGCGGCG CTGGCGTCGT TGCCGCGTCC GATTCCCATC
TGTGCGGATG AATCCTGCCA TGATCGCCGA TCACTGGCTG GGCTTGCCGC ACGCTATGAC
ATGATCAACA TCAAGCTGGA TAAAAGCGGC GGGCTAACCG AAGCCCTGCA TTTGCGCCAT
GCCGCACACG CCCAGGGGTT GAAAATCATG GTGGGATGCA TGGTCAGCAC CTCGCTGTCG
ATGGCGCCTG CCACGCTGGT GGCCCAAGGC GCTGACGTGG TCGACCTCGA CGGCCCATTG
CTATTGCAGG ACGATCGCGT CGGTGGGCTC GAATGGCGCG ATAGCCAATT GTACCTGCCG
GAAAACGGCT TATGGGGCCA GGGTCAGTCC CGCACATGTT TAACAGGAGT AGCGTGA
 
Protein sequence
MAELIFTHES WALRETFTIS RGSKTHAEVI KVTLSDGNHV GHGESVPYAR YGENISNVEA 
QLHSVADAIR QGMTRETLQD ALPPGAARNA LDCAYWDLAS RQQGKPVWQL AGLPRPTPLV
SAYTLSLDTP ERMAQSAQRN AYRPLLKLKL ADEQDIDRVA AVRRWAPESR LIVDANEGWD
AALYQRLVPE LLRLGVAMIE QPLPAREDAA LASLPRPIPI CADESCHDRR SLAGLAARYD
MINIKLDKSG GLTEALHLRH AAHAQGLKIM VGCMVSTSLS MAPATLVAQG ADVVDLDGPL
LLQDDRVGGL EWRDSQLYLP ENGLWGQGQS RTCLTGVA