Gene Dd703_1218 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDd703_1218 
Symbol 
ID8087779 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDickeya dadantii Ech703 
KingdomBacteria 
Replicon accessionNC_012880 
Strand
Start bp1394848 
End bp1395708 
Gene Length861 bp 
Protein Length286 aa 
Translation table11 
GC content59% 
IMG OID644835300 
Productaminotransferase class IV 
Protein accessionYP_002986844 
Protein GI242238663 
COG category[E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism 
COG ID[COG0115] Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase 
TIGRFAM ID[TIGR01121] D-amino acid aminotransferase 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTCGTA CTGTTTATGT TAACGGGCAA TATCTGCCTG AAGAAGCCGC CAAAGTCTCC 
GTGTTCGATC GCGGTTTTCT GTTCGCCGAT GCGGTGTATG AAGTGACGGC CGTCGTCAAC
GGCCGGCTGG CGGAATACGA CGGGCATATG GCGCGGCTGG CGCGTTCCTG CCGCGAGCTG
AACCTGCGTC TGCCGGTCAG CATTGAAGCA TTGCGAGAGA TCCACCTCGC GCTGATAGAA
AAAAACCAAC TTCAGGAAGG TGGCATCTAC CTGCAACTTA GCCGGGGCAG CACCGGTGAT
CGCGACTTTG CGTTTCCCGC CGACGCCGAA CCGACGCTGA TCTTGTTTAC ACAGGCACGG
CCGGTGATCC ATCACCCCTG CGCCGAGAAA GGTATCAAGG TCATTACCTG CCCGGATCTG
CGTTGGCACC GACGGGATAT CAAAACCGTC AGCCTGCTGA TGGCCTGCAT GGCGAAGGAA
TGGGCGCACG AAAAAGGCGC CGACGACGCC TGGCTGGTTG AAAATGGCCT GGTGACGGAA
GGCAGCTCCA GCAACTGCTA CATTGTCGAC GCCAACAACC ACGTCATTAC CCGTCCGCTC
AGCAACGACA TCCTGCACGG CATCACCCGT GCCGGCCTGC TGAAACTGGC GGCGCAGCAC
AACCTGGTGA TTGAAGAACG CGCCTTTACA CCAGAAGAAG CCCGCCACGC CAAAGAAGCC
TTTATCAGCT CCGCCACCAC CTTTGTCTGG CCAGTTGTAG AGATTGACGG CGTCACGATC
GGCGATGGGC GTCCCGGCCC GTTGGCGCGT CAATTGCGTG AGATCTACGT CGGCATGGTG
CAGGCTCAAA CGGCTGGATA A
 
Protein sequence
MSRTVYVNGQ YLPEEAAKVS VFDRGFLFAD AVYEVTAVVN GRLAEYDGHM ARLARSCREL 
NLRLPVSIEA LREIHLALIE KNQLQEGGIY LQLSRGSTGD RDFAFPADAE PTLILFTQAR
PVIHHPCAEK GIKVITCPDL RWHRRDIKTV SLLMACMAKE WAHEKGADDA WLVENGLVTE
GSSSNCYIVD ANNHVITRPL SNDILHGITR AGLLKLAAQH NLVIEERAFT PEEARHAKEA
FISSATTFVW PVVEIDGVTI GDGRPGPLAR QLREIYVGMV QAQTAG