Gene Dd703_1213 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDd703_1213 
Symbol 
ID8087774 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDickeya dadantii Ech703 
KingdomBacteria 
Replicon accessionNC_012880 
Strand
Start bp1387208 
End bp1389607 
Gene Length2400 bp 
Protein Length799 aa 
Translation table11 
GC content59% 
IMG OID644835295 
ProductTonB-dependent receptor 
Protein accessionYP_002986839 
Protein GI242238658 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1629] Outer membrane receptor proteins, mostly Fe transport 
TIGRFAM ID[TIGR01786] TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTCTTGC ATCGAAACAC AGAAACACAT CGCACCGGCC TGAGCCGGAT TATTCTGACC 
GGCGTGTTGT CCGGTCTGGC CTGCCAAACA TTGGCGGCAG AGACATCCAC CGCAGAGGAA
ACCACCAGGA AAACGGAAAA GTCCGCCGCC GATAAATCTC AGCCAACGGG CGATCAGATT
ACCGTCTTAT CGCCCAGGGT GAAAAAGCCC GGCACCACCA TTACGGTGAC AGAGGAAGAG
ATCCGCAAAA ACGGCGGCAA CGATTTCGGT TCCGTTATGC GTTATCAGCC GCTGGTCGGG
ACGACCGGCT CCAGTGGTGG TTCCGGTTCC GGCAAGAGCG GTTTCGATCG CAGCGGTTAT
ACCGGCTACA ACATCCGCGG ACTGGAGAGC AACCGGGTGG CGATCGACGT GGACGGTATT
CCGTTGCCGA ACGCGACCAG CCGTGGCTAT GCCGGACGCG CCGGGCTTGG CACCTTCGGT
ATCGGCCGCG ACTACATCGA CCCTTACATG TATGGATTGA TCAGTATCGA TGCCGGCGCC
ACGCCGGTTG AACGGGCGAA CAACGCCATC GGCGGCGCGG TGTCTTTCCG CCCTAAATCA
CCGGATCAGT ATCTCTCGGC GCAGAAAACC CACTATTTCG GCTACCAGAG CGGTTATGAC
TCCGCCAATC GCAGCTGGCA GAATGGCGTC ACTGTCGCCG GCGGCGATAA GACATTGCGC
GGTATTGTGG CGATCAGTCG TCGCGACGGC CAGGAAACCC GTACCAACAG CGATGCGTTG
TCGGCCTATC CCATGAACTG GCACTCTACC GCGGTCATGA CGTCGGCCAT CTGGCAGCCG
AATGATCAGC ACCGTTTCAC CGGTACGCTG GATTACTACG ACAAAACCAC CCATACCCAC
TATGACGGCT GGAACTCCAG CGGCAACGCC ATCGTCGGCA CGTCGCACCA GGAGAGTGAT
ACCCAGCGTT GGAGCATGAA CCTGCGCCAC AGCTGGACGG CGGCGGCCAG CGGCGGCCTG
GTGGATGCGG TGGATTCAAG GGTGTATTTC CAGCGTTCCA AAGCGCAGGA CGAGACCTAT
CTGCCGCAGG ACAGCGGCAG CATGTATACC ACCTACTCGG ATTACAATGT TAAGACCTTC
GGTGTCGAAA CCAGCCTGCT GAAAGAGTGG GGCATGCATC AGTTCACCTG GGGCTTTAAC
GCTCAACAGT CCAACACTGA GCGCCCGTTC CATCAGGCGC CGACGCAAAC CTACGCCAAC
GCGATCATGC AGCCGGAAGC GGACAGCCGC AGCTACAGCC TGGGCGGCTT TGCGCAGGAT
AAAATGGATT TCGAGGTGGC AGGCAAAACG CTGTCCGTCA CGCCGGGCGT GCGAGTGGCT
TACCAGAATA CCAAACCGCG TAATCTCTCC AGCCTGAGCG CGGGCAGCAG CGTGATTGAC
AGCGACGATG TGACGGCGTT GTACGATAAG ACGAACAGCG ATACGCAGGT ATTGCCGTCG
CTGAGTTTGC AGTATGAGCT GGCGCCGCGT CTGAGCACCT ATCTGCAGTA CCGCCGCGGC
GCGCAGTTCC CGGATGCCGG CCAGCTGTAC GGATCCTGGG GGTTGGGATC CAACTATGCC
GGGCGCGCCC AGTACGCGCT GATTGGCAAC ACCTCGCTGA AAACCGAAAC CAGTGATAAC
TACGAATGGG GCCTGAAAGG CGATATTACC GAAGGCGTGG CCTTCCGTTC CGCGCTGTTC
TACAACAACT ATCGTGATTT TATCGCTTAT ACCCGTTACA CCCGCGCCGC CAATCCGGAG
CGGTTTACCA CTGTTCCGAG CAACATCTAC ACCGCTTATC AGGCGGAAAA CCGCGACAAA
GCCTATATTT ACGGCGCCGA ATTCAGCAGC CGTATTCAGT GGGGAACGTG GTTCAACACC
TTGAACGGGG TGAGCACCAC GCTGGCGGTG GGCTATAGCG AAGGCAAGTC GAAATCCAGC
TATCTGGGCG ATCGCTATGT GGATCTGGAC AGCGTGGCGC CGGTGAAAGC AGTGATCGGT
TTGGCATGGG ACGACCCTGA AAAACGCTAC GGCGCAGCGG TTAACGCCAC CTTCCAGAAA
GGTAAACAGG CCACGGCGAC CAACCGCCAA AGCTACAGCA ACAGCGGTAC GGCGCTGACG
GACTCGTCGT CCAGCTACCT GCGTATTCCC GGTTACGGGC TGGTGGATCT GACCGCCTAC
TGGCAGGTGC TGCCTCACGT TAGGTTGAAC GGCGGCGTGT ATAACCTGAC CGATCGCAAA
TACTGGGATT ATCTCAGCAG CCGTCAGTTG ACGCTGGCGA CCAATCAGGA TCTCTACAAC
AAGGAGCTGG CGGTGATGCC GGGACGAACC TTCCAACTGG GCGTGAATGT GGAGTTCTGA
 
Protein sequence
MFLHRNTETH RTGLSRIILT GVLSGLACQT LAAETSTAEE TTRKTEKSAA DKSQPTGDQI 
TVLSPRVKKP GTTITVTEEE IRKNGGNDFG SVMRYQPLVG TTGSSGGSGS GKSGFDRSGY
TGYNIRGLES NRVAIDVDGI PLPNATSRGY AGRAGLGTFG IGRDYIDPYM YGLISIDAGA
TPVERANNAI GGAVSFRPKS PDQYLSAQKT HYFGYQSGYD SANRSWQNGV TVAGGDKTLR
GIVAISRRDG QETRTNSDAL SAYPMNWHST AVMTSAIWQP NDQHRFTGTL DYYDKTTHTH
YDGWNSSGNA IVGTSHQESD TQRWSMNLRH SWTAAASGGL VDAVDSRVYF QRSKAQDETY
LPQDSGSMYT TYSDYNVKTF GVETSLLKEW GMHQFTWGFN AQQSNTERPF HQAPTQTYAN
AIMQPEADSR SYSLGGFAQD KMDFEVAGKT LSVTPGVRVA YQNTKPRNLS SLSAGSSVID
SDDVTALYDK TNSDTQVLPS LSLQYELAPR LSTYLQYRRG AQFPDAGQLY GSWGLGSNYA
GRAQYALIGN TSLKTETSDN YEWGLKGDIT EGVAFRSALF YNNYRDFIAY TRYTRAANPE
RFTTVPSNIY TAYQAENRDK AYIYGAEFSS RIQWGTWFNT LNGVSTTLAV GYSEGKSKSS
YLGDRYVDLD SVAPVKAVIG LAWDDPEKRY GAAVNATFQK GKQATATNRQ SYSNSGTALT
DSSSSYLRIP GYGLVDLTAY WQVLPHVRLN GGVYNLTDRK YWDYLSSRQL TLATNQDLYN
KELAVMPGRT FQLGVNVEF