Gene Dd703_1205 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDd703_1205 
Symbol 
ID8087766 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDickeya dadantii Ech703 
KingdomBacteria 
Replicon accessionNC_012880 
Strand
Start bp1378721 
End bp1379836 
Gene Length1116 bp 
Protein Length371 aa 
Translation table11 
GC content54% 
IMG OID644835287 
Productdiguanylate cyclase 
Protein accessionYP_002986831 
Protein GI242238650 
COG category[T] Signal transduction mechanisms 
COG ID[COG2199] FOG: GGDEF domain 
TIGRFAM ID[TIGR00254] diguanylate cyclase (GGDEF) domain 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGTTGT CATCCTCCAT TACTTACGCA GAGTCTGAAC GTCGCCGAAC GGGGTTGGCA 
TTTGCCCGGC GTGTGTATAT GCCTCGGGCG ATTGGACTGG GTCTGGGATT CTTTTATGTA
GCAGCTGCGC TGTATGGCAG ACAGTTGCCC GTCTGGGCTT GGGGTCTGTT GGTCGCCCAT
GGTTTCCTCT GGCCTCACAT CGCTTACCTG GTGTCATCCC GCGCCAGAGA TCCGATGCGC
AGGGAGTATG GCAACCTGCT GATAGATGCT GCGTTTGGCG GGATCTGGAT TGGTGTCATG
GGGTTGAATG GTCTGCCTTC GGTACTGATT ATGTCGATGA TGGGGATGAA TAATATCGCG
GCGGGCGGTC TGAAACTTTT CTTGCAAGGA TTGGGGGTTC AGGTGCTTTG CGTTGCTGTG
TTCTTGTTGC TGATACAGAG CCCCATCAAC ACCGCCACCA CGACGATACA ACTCTATTTT
TGCCTACCCA TGTTGTTTAT TTATCCTATT TCCGTCGGGT TAGTCACTTA TCGCACAGCG
ATGAAATTAG CCGAACACAA ACGGCGGCTA AAAGAGATGA GCATCCATGA TGGCATGACC
CGTCTTTACA ATCGCCAGCA TTGGGAACAA CTACTGCAGA ACGAGTTCGA CATCTGTGCC
CGTTATCAGC GCGTGGCAAC GCTGGCATTG CTGGATGTCG ATCACTTCAA AACCATCAAT
GATAATTTCG GCCACCATGT CGGGGACGAT GCGCTGCTTT TGCTGAGCAA CGGTCTGAAA
TCGACATTGC GGCAAGCGGA TATCATCGGG CGCTTCGGCG GTGATGAGTT CGGCATTGTG
TTTCCGGAAA CCCGGGTGGA TGAGGCGAGG TTGGTGGTCG AGCGCCTGCG GGAGTACCTG
GAAAGTGTGC AGTTGCACCA TACGCCCTTG TTGCGTATTG GCATCAGTGC CGGTTTGGTG
CAGTTTAGCT CGGAGATGTC CGATCACCGG GCCTGGATGA GAGCGGCGGA TATGGCGCTT
TATCAGGCTA AAAATCGCGG CCGGGGGTGC TCGGTTTGCG TCGACAGTCT GTCTGCCGCT
ACGGTGTCGG ATGAGCGACA AACAGTTCCG CAATGA
 
Protein sequence
MTLSSSITYA ESERRRTGLA FARRVYMPRA IGLGLGFFYV AAALYGRQLP VWAWGLLVAH 
GFLWPHIAYL VSSRARDPMR REYGNLLIDA AFGGIWIGVM GLNGLPSVLI MSMMGMNNIA
AGGLKLFLQG LGVQVLCVAV FLLLIQSPIN TATTTIQLYF CLPMLFIYPI SVGLVTYRTA
MKLAEHKRRL KEMSIHDGMT RLYNRQHWEQ LLQNEFDICA RYQRVATLAL LDVDHFKTIN
DNFGHHVGDD ALLLLSNGLK STLRQADIIG RFGGDEFGIV FPETRVDEAR LVVERLREYL
ESVQLHHTPL LRIGISAGLV QFSSEMSDHR AWMRAADMAL YQAKNRGRGC SVCVDSLSAA
TVSDERQTVP Q