Gene Dd703_1189 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDd703_1189 
Symbol 
ID8087750 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDickeya dadantii Ech703 
KingdomBacteria 
Replicon accessionNC_012880 
Strand
Start bp1357686 
End bp1359179 
Gene Length1494 bp 
Protein Length497 aa 
Translation table11 
GC content61% 
IMG OID644835271 
Productextracellular solute-binding protein family 5 
Protein accessionYP_002986815 
Protein GI242238634 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0747] ABC-type dipeptide transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACATT CTGTCCGTAC TATTGCTTCT TTGGTTGTGC TGTTCAGTCT GCTTTCGCCC 
GTCGGCCGGG CTAGCGAACT GGTGATTGGC CAACCTGCTT CCGCCACCGC CATGGATCCC
GGCTTCCTCA AGGAAGCCGC CACCCTCGTC GACAACATTT TCGATACGCT GGTGTTGCGC
GACGCCGATA TGCAGCTGCA ACCCGGCCTC GCCACCGCCT GGAAAGCGCT GGATACCACC
ACCTGGCAGT TCGATCTTCG TCAAGGGGTC ACGTTCACCA ACGGAGAACC GGTCAACGCG
GCGGCGGTGA AATTCTCCAT CGATCGGATT CTGGATCCGG CCAATAAGGC GCCGACCATC
TCCTATATCC GTACTATCGC CTCGGTGGAA GTCACCGGCG ATTATCAGGT ACGTATTCAC
ACGCAGGGCC CGGATCCGCT GCTACCCACG CGCATGAGTC GCTACCCGAC GTACATCGTT
CCCCCCGCCT ACGTCAGCCG GGTCGGCGCG GCGGAATTCG CCCGCAAGCC GATCGGCAGC
GGCGCCTATA TTCTGAAAGA GTTCATTCCC GACGAACGGG TGGTGATGCA GGCCAACCCG
AACTACTGGC GCGGCAAGCC CACCATCGAT CAGGTCATCT GGCGCCCGAT ACCTGAAGCC
ACCGCCCGCA TCACTGCCTT ATTGACCGGC GAGGTTCAGC TGGTGGACGG TGTGCCGGCC
AACCTGGTGC CGACGTTGCA AAACAAGCCC GGCATACGGT TGGAACAGGT GAAAGGCGGC
GGATTGACTC TCTATCTGGG GCTGAAAAAC AACCAGAAAC CGCTGGATGA CGTGCGGGTG
CGTCAGGCCA TCTCGCTGGC GCTGAACCGT CAGGCATACA CCAGTCAGTT GCTGCATAAC
TTCGGCACCC CAACCGGCAC CCTGCCGCGG CCGAAAGATT TCGGCTATCT GGATATTCCG
GCGCCGAAGC AAGACATCGC CAAAGCCAAA GCCCTGTTAC GGGAAGCCGG CTACCCAGAT
GGATTCAGCC TGAAATTCCA GGCGCCGCGC CGCTATATCG CCAGCGCCGA AGTGGCGCAG
GCCATCGTGC AGGATCTGGC CGCCGTGGGC ATCAACGCGC AGTTGGACGT GCCGGAATGG
TCGGTGTACA CCCAGCAGGT GGCCTCCGGC AAGCAGGCGG AGCTGTATAT GCTGGCCTGG
GGATCGACCC AAACGCTGGA TGCGGACGCC GCGCTCTACC CGGTGCTGCA TTCGGGCGAA
CCCTACTCCA CCGTCAATGC GCCGGAGTTG GATACCTTGC TGAACGACAG CCGCGCCACC
GTCGACAGCC AGAAGCGCGA GCAGATCCTG CATAAAATCC AGCAGTGGGT GGCCGAGCAA
CAGCCGCTGA TCCCGCTCTA CCGAGAAGAT TCGCTCTACG CCGGCAGCGA CAAGTTGCAT
TTCACCGGCC GGGCCGATGC CCGCATCCCA CTGTTCGATC TGACGCTGCC ATGA
 
Protein sequence
MKHSVRTIAS LVVLFSLLSP VGRASELVIG QPASATAMDP GFLKEAATLV DNIFDTLVLR 
DADMQLQPGL ATAWKALDTT TWQFDLRQGV TFTNGEPVNA AAVKFSIDRI LDPANKAPTI
SYIRTIASVE VTGDYQVRIH TQGPDPLLPT RMSRYPTYIV PPAYVSRVGA AEFARKPIGS
GAYILKEFIP DERVVMQANP NYWRGKPTID QVIWRPIPEA TARITALLTG EVQLVDGVPA
NLVPTLQNKP GIRLEQVKGG GLTLYLGLKN NQKPLDDVRV RQAISLALNR QAYTSQLLHN
FGTPTGTLPR PKDFGYLDIP APKQDIAKAK ALLREAGYPD GFSLKFQAPR RYIASAEVAQ
AIVQDLAAVG INAQLDVPEW SVYTQQVASG KQAELYMLAW GSTQTLDADA ALYPVLHSGE
PYSTVNAPEL DTLLNDSRAT VDSQKREQIL HKIQQWVAEQ QPLIPLYRED SLYAGSDKLH
FTGRADARIP LFDLTLP