| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd703_1187 |
|---|
| Symbol | |
|---|
| ID | 8087748 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dickeya dadantii Ech703 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012880 |
|---|
| Strand | - |
|---|
| Start bp | 1355919 |
|---|
| End bp | 1356833 |
|---|
| Gene Length | 915 bp |
|---|
| Protein Length | 304 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 644835269 |
|---|
| Product | binding-protein-dependent transport systems inner membrane component |
|---|
| Protein accession | YP_002986813 |
|---|
| Protein GI | 242238632 |
|---|
| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.127096 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCGCGCT ATATTCTCTC CCGCATCGGG CAAGCCGTGT TGGTGATGTT CGGCGTATCG
CTGCTGATTT TTTACAGCCT GCATCTGACC GGCGATCCGG CGGCCGTCAT GATGCCGCCG
GGCTCCAGCC AACAGGAGAT CGATGTTTTT CGTCACAGCA TGGGATTCGA CCAGCCGTTA
TTGCAGCAGT ACGGCCATTA CCTCGGCAAC GTGTTGCGCG GCGATCTCGG CGCCTCGCTG
CGTTACGAGC AGCCGGTGGT CAGCCTGATC GCAGCACGAA TTCCCGCAAC GCTGCTGCTG
GCGGTGGCCG CGCTGGTCTG GAGCACAGCG GCCGGCCTGT TGCTCGGCAT AATCAGCGCC
GTCAGGCGAG ATTCGGTCTG GGATCTACTC GCCAGGCTGC TGGCGTTCAG CGGACAGGCC
ATTCCGGTGT TCTGGCTTGG GCTACTGCTG ATTATCCTGT TCAGCCTCAA TCTGCACTGG
TTGCCCTCCG GCGGCTACGG CAGCGCCAGT CAGTTGCTGA TGCCCGCCGT CAGCCTGGGC
GCCTACTACA TGAGCGCCAT CGCCCGGCTG GTGCGGGCCA GCCTGATCGA CGTATTGCAG
CAGGAATATA TCCGCACCGC GCAGGCCAAA GGGCTAAGCC AGACGCGCAT TCTGTTCCTC
CACGCGCTGC GCAATGCGCT GATCCCGGTC GTGACCGTTC AGGGCATGTA TTTCGCGTCC
TTGTTGGGAG GCGCGCTGGT CACTGAGATC ATTTTCGCCT GGCCGGGCAT TGGTCGGCTG
GCGGTACAAG CGATCCAAAA CCGCGACTTC CCGCTGGTGC AGGCCATCGT ATTGCTGGCG
GCGCTGGTGT TCGTGGTCAT CAACCTGCTG ATCGACCTGC TGTATGTGGT GCTCAACCCG
AGGATAAAAC TGTGA
|
|---|
| Protein sequence | MPRYILSRIG QAVLVMFGVS LLIFYSLHLT GDPAAVMMPP GSSQQEIDVF RHSMGFDQPL
LQQYGHYLGN VLRGDLGASL RYEQPVVSLI AARIPATLLL AVAALVWSTA AGLLLGIISA
VRRDSVWDLL ARLLAFSGQA IPVFWLGLLL IILFSLNLHW LPSGGYGSAS QLLMPAVSLG
AYYMSAIARL VRASLIDVLQ QEYIRTAQAK GLSQTRILFL HALRNALIPV VTVQGMYFAS
LLGGALVTEI IFAWPGIGRL AVQAIQNRDF PLVQAIVLLA ALVFVVINLL IDLLYVVLNP
RIKL
|
|---|
| |