| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd703_1156 |
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| Symbol | tolB |
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| ID | 8087717 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dickeya dadantii Ech703 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012880 |
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| Strand | + |
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| Start bp | 1322108 |
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| End bp | 1323394 |
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| Gene Length | 1287 bp |
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| Protein Length | 428 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 644835238 |
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| Product | translocation protein TolB |
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| Protein accession | YP_002986783 |
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| Protein GI | 242238602 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0823] Periplasmic component of the Tol biopolymer transport system |
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| TIGRFAM ID | [TIGR02800] tol-pal system beta propeller repeat protein TolB |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGCAGG CATTAAAAAT TGCATTGAGT TTTCTGATGC TGTGGGCTGC TGTGTTGCAT
GCAGAAGTCC GCATTGAAAT TACCCAAGGG GTCGATTCTG CTCGACCGAT TGCCGTTGTT
CCGTTCAAAT CAGCCGGTGG TGCCGTGCCG GAAGATATTG GCAATATTGT CGCGGCTGAC
TTGCGCAATA GTGGCAAGTT CAACCCTATT GACCCCAGCC GTATGCCGCA GCAACCGGGA
ACGGCTGCTG AAGTTACCCC AGCAGCCTGG ACCGCGCTTG GTATTGATGC GGTTATTGTG
GGGCAGGTTC AGCCAACAGC TGACGGATAT CTGATTTCCT ACCAACTGGT CGATACATCC
GGCAGCGCAG GGAGTGTATT GGCGCAGAAT CAGTTCAAAG TGACCAGACA ATGGCTGCGT
TATGCCGCGC ATACTGCCAG TGATGAAGTT TTTCAGAAAC TGACGGGAAT CAAAGGCGCT
TTCCGCACAC GTATCGCTTA CGTTGTCCAG ACGAATGGCG GCCAGTATCC CTATGAGCTT
CGCGTTGCGG ACTATGATGG CTACAACCAG TTTGTCGTTC ATCGTTCTCC CGAACCGTTG
ATGTCGCCAT CCTGGTCTCC GGATGGGAGC AAACTGGCTT ACGTGACTTT CGAAAGTGGC
CGTTCCGCAC TGGTTATTCA AACGCTTGCC AATGGCGATA TTCGTCAGGT GGCTTCCTTT
CCCCGCCACA ACGGCGCCCC GGCATTTTCT CCGGATGGGA GCAAACTGGC GTTCGCTCTT
TCCAAGAGTG GTAGTCTGAA TCTGTATGTA ATGAACCTTG GGTCGGGGCA AATCTCGCAG
ATCACGGATG GCCGTAGCAA TAACACCGAG CCAACCTGGT TCCCGGATAG TCAAACGCTG
GCCTATACTT CTGACCAGGC CGGGCGCCCC CAGATTTATA AAATTGGCGC TAATGGCGGC
ACTCCGCAGC GTCTGACCTG GGAAGGTGCT CAGAACCAGG ATTCCGAGGT CAGCAGTGAT
GGCAAATTTA TCGTGATGGT GAGCTCCAAT AGCGGTGCTC AACACATTGC TAAACAGGAT
CTGGTAACGG GTGGCGTTCA AGTTCTGACG GACACGTTCC TGGATGAAAC GCCGAGTATC
GCGCCTAATG GCACCATGGT AATCTACAGT TCGAAGCAAG GGCTGGGATC CGTGCTGCAG
TTGGTTTCGA CGGACGGCCG TTTCAAAGCG CGTCTTCCGG CTACTGATGG TCAGGTCAGA
TTTCCTGCCT GGTCGCCGTA TCTCTAA
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| Protein sequence | MKQALKIALS FLMLWAAVLH AEVRIEITQG VDSARPIAVV PFKSAGGAVP EDIGNIVAAD
LRNSGKFNPI DPSRMPQQPG TAAEVTPAAW TALGIDAVIV GQVQPTADGY LISYQLVDTS
GSAGSVLAQN QFKVTRQWLR YAAHTASDEV FQKLTGIKGA FRTRIAYVVQ TNGGQYPYEL
RVADYDGYNQ FVVHRSPEPL MSPSWSPDGS KLAYVTFESG RSALVIQTLA NGDIRQVASF
PRHNGAPAFS PDGSKLAFAL SKSGSLNLYV MNLGSGQISQ ITDGRSNNTE PTWFPDSQTL
AYTSDQAGRP QIYKIGANGG TPQRLTWEGA QNQDSEVSSD GKFIVMVSSN SGAQHIAKQD
LVTGGVQVLT DTFLDETPSI APNGTMVIYS SKQGLGSVLQ LVSTDGRFKA RLPATDGQVR
FPAWSPYL
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