Gene Dd703_1106 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDd703_1106 
Symbol 
ID8087661 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDickeya dadantii Ech703 
KingdomBacteria 
Replicon accessionNC_012880 
Strand
Start bp1265373 
End bp1265858 
Gene Length486 bp 
Protein Length161 aa 
Translation table11 
GC content56% 
IMG OID644835182 
Productputative metalloprotease 
Protein accessionYP_002986733 
Protein GI242238552 
COG category[R] General function prediction only 
COG ID[COG0319] Predicted metal-dependent hydrolase 
TIGRFAM ID[TIGR00043] metalloprotein, YbeY/UPF0054 family 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCCAGG TTATCCTTGA TTTGCAAATT GCCTGTGCGA ACCAGGACGG TCTTCCGGCC 
GAAAGCACAT TCCAGCGGTG GTTAGAGGCG GTTTTACCGC AGTTTCAGGA GGTGGCGGAA
GTCACCGTTC GCCTGGTGGA TGAAGAAGAG AGCCATCATC TCAACCTTAC CTACCGGGGC
AAAGACAAAC CCACCAACGT GCTGTCGTTT CCCTTTGAAG CGCCGCCGGA AGTCGAACTG
CCGTTGCTGG GCGACCTGAT CATCTGCCGC CAGGTGGTAG AGCAGGAAGC GGCCGAGCAG
GAAAAGACCA CTGAGGAGCA TTGGGCGCAC ATGGTTGTCC ACGGCTGTCT GCATCTGCTA
GGGTATGACC ATATCGAAGA CAGCGAAGCC GAAGAGATGG AAGCGCTGGA AACGGAAATC
ATGCAGGGCA TGGGGTACGC GGATCCCTAT CTGTCAGAAA AGGAAAATGC TGACGACCGG
CCCTGA
 
Protein sequence
MSQVILDLQI ACANQDGLPA ESTFQRWLEA VLPQFQEVAE VTVRLVDEEE SHHLNLTYRG 
KDKPTNVLSF PFEAPPEVEL PLLGDLIICR QVVEQEAAEQ EKTTEEHWAH MVVHGCLHLL
GYDHIEDSEA EEMEALETEI MQGMGYADPY LSEKENADDR P