Gene Dd703_1089 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDd703_1089 
Symbol 
ID8087644 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDickeya dadantii Ech703 
KingdomBacteria 
Replicon accessionNC_012880 
Strand
Start bp1246903 
End bp1248114 
Gene Length1212 bp 
Protein Length403 aa 
Translation table11 
GC content51% 
IMG OID644835165 
ProductD-alanyl-D-alanine carboxypeptidase fraction A 
Protein accessionYP_002986716 
Protein GI242238535 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1686] D-alanyl-D-alanine carboxypeptidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.114599 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATAGAG TAATCACGTC TCGCTTTACT AAACGTATTG TGCTCGGCAC ACTGCTCGTC 
CTCGGCGTAT CTGCGTTTTC CCATGCCGAA GACATTAATC TGAAAACCAT GATTCCTGCC
GTTCCGGATA TTGATGCCGA AGCATACATC CTGATTGATT ACAACTCGGG TAAAGTCCTG
GCCGAAAAAA ATGCCGATGT ACGCCGCAAT CCGGCCAGCC TGACCAAGAT GATGACCAGC
TATGTCATCG GCCAGGCCAT TAAAGCAGGG AAGATCAACC CGAATGACAT CGTGACCATC
GGTAAAGACG CCTGGGCCAC CGGCAACCCT GACTTTCAGG GTTCTTCGCT GATGTTTCTT
AAACCCGGTG ATCGTGTTCC GGTTCACATG CTGAACAAAG GCATCATTCT CCAGTCCGGT
AATGACGCCT GCGTCGCCAT GGCTGACTAT GTCGCCGGCA GTCAGGATGC GTTCATCAGT
TTGATGAACG GTTACGTTAA ATCATTGGGA TTGCAGAATA CACAGTTCAA GACCGTGCAC
GGTCTTGATG CGGAAGGCCA ATATAGCTCG GCGCGCGACA TGGCGCTGAT CGGCCAGGCA
TTGATTCGCG ATGTACCGAA CGAATATGCC ACTTATAAAG AAAAAGAGTT CACTTTCAAT
AATATCCGTC AGATGAACCG TAATGGTTTG CTGTGGGATT CCAGCCTGAG CGTGGATGGC
ATCAAAACCG GTCACACCGC TTCCGCCGGT TATAACCTGG TGGCTTCAGC AACCGAAGGC
CAGATGCGCC TGATTTCCGC AGTGTTGGGC GGCCGTACTT TCAAGGGGCG TGAGTCGGAA
AGCAAAAAAC TGCTGACATG GGGTTTCCGT TTCTTCGAAA CGGTAGCACC GTTGAAAGCA
GACAAAGAAT TCGCGTCTGA ACCCGTCTGG TTCGGGAATG CCGACAGGGT CTCGCTGGGA
GTGGAAAAAG ATGCTTACAT CACTATTCCT CGCGGACGCA TGAAAGACCT GAAAGCCAGT
TATGTACTCA ACAATACCGA GCTGCATGCT CCGCTGGCCA AGAATCAGGT AGTGGGCACG
ATCAATTTCC AACTGGATGG CAAAGTTATC GAACAACGAC CGCTGGTCGT GATGAACGAT
GTCAAAGAAG GCGGGATCTT TGGTCGCCTG TTTGACTATA TCAAGCTGAT GTTCCACCGT
TGGTTCAGTT GA
 
Protein sequence
MNRVITSRFT KRIVLGTLLV LGVSAFSHAE DINLKTMIPA VPDIDAEAYI LIDYNSGKVL 
AEKNADVRRN PASLTKMMTS YVIGQAIKAG KINPNDIVTI GKDAWATGNP DFQGSSLMFL
KPGDRVPVHM LNKGIILQSG NDACVAMADY VAGSQDAFIS LMNGYVKSLG LQNTQFKTVH
GLDAEGQYSS ARDMALIGQA LIRDVPNEYA TYKEKEFTFN NIRQMNRNGL LWDSSLSVDG
IKTGHTASAG YNLVASATEG QMRLISAVLG GRTFKGRESE SKKLLTWGFR FFETVAPLKA
DKEFASEPVW FGNADRVSLG VEKDAYITIP RGRMKDLKAS YVLNNTELHA PLAKNQVVGT
INFQLDGKVI EQRPLVVMND VKEGGIFGRL FDYIKLMFHR WFS