| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd703_1079 |
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| Symbol | |
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| ID | 8087634 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dickeya dadantii Ech703 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012880 |
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| Strand | - |
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| Start bp | 1239437 |
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| End bp | 1240117 |
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| Gene Length | 681 bp |
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| Protein Length | 226 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 644835155 |
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| Product | peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin |
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| Protein accession | YP_002986706 |
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| Protein GI | 242238525 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1876] D-alanyl-D-alanine carboxypeptidase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.234165 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGATAGCCA TAGCCTGCCT GACGGGAAAA AGCGACCGCC ATCTGGCAAC GTTGGCCGGG
TCTCACCGCC TCCAGCCAGA AGCCGTTCAT GCCTTCCTGG CTCTACAGCA GGCTGCTCGA
CAGGCGGGCT TTAATCTGCA ACCTGCCAGC ACTTTTCGGG ATTTTGAACG TCAGCGCCTG
ATCTGGAACG GCAAATTCAA CGGCCAGCGC CCTCTGCTTG ATCAGAGCAG CAAACCGATT
GATGCCCTGA CGCTTAATGA AGGCGAACGT TGCGAAGCGA TATTACGTTG GTCGGCATTG
CCAGGAGCCA GTCGTCATCA TTGGGGTAGC GATCTGGACA TCTACGATCC TGACTGCCTG
CCGGAAGGAC AACCGCTCCA ATTAGAGCCC TGGGAATACG AACCCGGTGG ATATTTTGCA
GCGTTGAACA TCTGGCTGAC GGACAATATG GCCGCGTTCG GCTTTTATCG CCCATTTGCG
CAGGATCATG GTGGAGTAGC CGTCGAGCCC TGGCATATCA GTTATGCCCC TCTGGCGTCC
GCAGCCGCTC AGTTACTGAC TCCGGATGTA CTCCTGCAGG CTTGGCATGG TGAAGAGATC
GCCGGGCAAA ATTGGTTAAA AGCGCACCTT TCCGCATGGT TCGAACGATT TATTGCTTCT
GTTGATAAGG AGCCACAATG A
|
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| Protein sequence | MIAIACLTGK SDRHLATLAG SHRLQPEAVH AFLALQQAAR QAGFNLQPAS TFRDFERQRL
IWNGKFNGQR PLLDQSSKPI DALTLNEGER CEAILRWSAL PGASRHHWGS DLDIYDPDCL
PEGQPLQLEP WEYEPGGYFA ALNIWLTDNM AAFGFYRPFA QDHGGVAVEP WHISYAPLAS
AAAQLLTPDV LLQAWHGEEI AGQNWLKAHL SAWFERFIAS VDKEPQ
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