Gene Dd703_1072 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDd703_1072 
Symbol 
ID8087627 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDickeya dadantii Ech703 
KingdomBacteria 
Replicon accessionNC_012880 
Strand
Start bp1232683 
End bp1233561 
Gene Length879 bp 
Protein Length292 aa 
Translation table11 
GC content55% 
IMG OID644835148 
Productdihydrodipicolinate synthase 
Protein accessionYP_002986699 
Protein GI242238518 
COG category[E] Amino acid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0329] Dihydrodipicolinate synthase/N-acetylneuraminate lyase 
TIGRFAM ID[TIGR00674] dihydrodipicolinate synthase 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTACGG GTAGTATTGT TGCTCTGGTT ACGCCGATGG ACGACAAAGG TGCCGTTGAT 
CGTGCAAGCC TGAAAAAACT GATTGATTAT CATGTCGCTA GCGGGACTGC AGCGATTGTG
TCGGTGGGTA CCACCGGTGA ATCCGCCACG TTGGGCCATG ATGAGCACGG CGAAGTGGTG
ATGATGACGC TGGAATTGAG CGATGGCCGT ATTCCCGTTA TCGCCGGAAC CGGCGCCAAT
TCAACTGCGG AAGCCATTTC ACTCACCCAA CGTTTCAACG ATACCGGCGT AGCCGGTTGC
CTGACGGTGA CGCCTTATTA CAACAAGCCG ACCCAGGAAG GCTTGTATCT GCACTTCAAA
GCTATCGCCG AACATACCGA TTTACCGCAA ATTCTGTACA ACGTCCCGGC GCGTACCGGT
TGCGATATGC TGCCTGAAAC CGTCGCCCGT CTGTCGGAAG TCAAAAATAT TGTCGCCATT
AAGGAAGCCA CAGGGAACTT AAGCCGCGTC AGTCAGATCC AAGAACTGGT TCGTGAAGAT
TTCATTTTGC TGAGCGGCGA TGACGCCAGC GGGCTGGACT TCATGCAATT GGGCGGCAAA
GGGGTGATTT CCGTAACAGC CAACATCGCG GCCCGTGAAA TGGCGGCGAT GTGCGAACTG
GCTGCGCAGG GGAATTTTGC CGAAGCCCGC CGTCTGAACC AGCGTTTGAT GCCGCTGCAT
CAGAAACTGT TTGTTGAACC CAACCCCATC CCAGTGAAAT GGGCGTGCAA GGCGTTGGGA
TTGATGGCGA CCGATACGCT TCGCCTGCCG ATGACCCCGT TGACGGAATC TGGCCGTACC
GTGGTTGAGC AGGCCCTGAA GCAGGCGGGT TTGCTGTAA
 
Protein sequence
MFTGSIVALV TPMDDKGAVD RASLKKLIDY HVASGTAAIV SVGTTGESAT LGHDEHGEVV 
MMTLELSDGR IPVIAGTGAN STAEAISLTQ RFNDTGVAGC LTVTPYYNKP TQEGLYLHFK
AIAEHTDLPQ ILYNVPARTG CDMLPETVAR LSEVKNIVAI KEATGNLSRV SQIQELVRED
FILLSGDDAS GLDFMQLGGK GVISVTANIA AREMAAMCEL AAQGNFAEAR RLNQRLMPLH
QKLFVEPNPI PVKWACKALG LMATDTLRLP MTPLTESGRT VVEQALKQAG LL