Gene Dd703_1056 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDd703_1056 
Symbol 
ID8087611 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDickeya dadantii Ech703 
KingdomBacteria 
Replicon accessionNC_012880 
Strand
Start bp1212930 
End bp1215362 
Gene Length2433 bp 
Protein Length810 aa 
Translation table11 
GC content64% 
IMG OID644835132 
Productprotein of unknown function DUF214 
Protein accessionYP_002986683 
Protein GI242238502 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG3127] Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTTGGC GTTGGTTCTG GCGGGAATGG CGATCGCCGT CGTTGTTGAT TGTCTGGGTG 
GCGCTGACGC TATCGGTAGC GTGCGTTCTG GCGTTGGGGA CGCTCAGCGA TCGGATGGAC
AAGGGCCTCA GCCAGCAGAG TCGGGATTTT CTGGCGGGCG ACCGGGTGTT GCGCGCCGCC
CGGCCGGTGG ATGAATTGTG GTTGCAACAA GCCGGGCAGC AGGGGCTGAC GGTCAGCCGG
CAAGTGTCGT TCATGACCAT GACCTATGCC GGCGACAATG CGCAACTGGC GCAGGTGAAA
GCCGCCGACG AGCGTTATCC CTTGTACGGC GAATTGCAGA CCCGGCCCGC CGGGCTGCGG
GCGTCGGCCG GTCACGCGCT GGTGGCGCCG CGCCTGCTGG CGCTGCTGAA TCTGAAAGTC
GGCGACCATC TGGACGTGGG CGATACCACG CTGCGTATCG CCGGCGAGCT GGTGCAAGAG
CCGGACGCCG GGTTTAATCC GTTCGATACT GCGCCGCGCG TGCTGATCAG CATGGCGGAT
GTGGAAAAAA CCGGCGCGGT GCAACCCGGC GGACGTATCA CCTGGCGCTA TATGTTCGCC
GGCGACGCCC GGCAGATTGC CCGCTTCGGC GATATCGTCA CGCCGCAGTT GAAACCGGAT
CAGCGCTGGT ATGGCGTGGA GGATTCACAA AATGCGCTGG GGAAAACCCT ACAGCGGGCC
CAACAGTTTT TGTTGCTGTC GGCCTTGCTG ACGCTGTTGT TGTCGGTGGC GGCGGTCGCC
GTGGCGATGG GGCACTATTG CCGTAGTCGC TACGATCTGG TGGCTATTCT CAAAACGTTG
GGCGCCGGCA GGCAGGCGCT GCGCAAACTG ATCGTCGGCC AGTGGCTGTC GTTGCTGCTG
TTTTCCGGGG TATGCGGCAG TGTGTTGGGG CTGGCGGGTG AAGCGGTATT GATGACGTTG
CTGGCACCGG TGCTGCCTGC GGCCCTGCCT GCTGCAGGGC TGTGGCCGTG GGGATGGGCG
CTGGGGTCGC TGGTGCTGAT TTCCTTGCTG GTGGGCTGGC GGCCGTATCG TTTGCTGCTG
GCGACGCAGC CGTTGCGGGT GCTGCGCCAG GATGTGACGG CACGGGGTTG GCCGTTGCGC
TATTACCTGC CGACGGCGGT CGGGGTGGTG ATTGCGCTGT TGGCGGCGAT CTCCGGCGGC
GGCGCGCTGT TGTGGTCATT ATTGGGGGGC GTGCTGGCGG TATCTGCGCT GCTGGCGGCG
ATTGGCTGGG GCGGCCTGCT GCTGTTGCGG CGGCTGACGC TCAAACGGCT GGCGTTACGG
CTGGCTGTCA ATCGTCTGCT GCGCCAGCCC TGGGAGACGC TGGGCCAGCT GGCGGCTTTT
TCGCTGTCGT TTATGCTGCT GGCGCTGTTG CTGCTATTGC GGGGCGATCT GCTGGAGCGC
TGGCAGCAGC AATTGCCGCC GGGCAGCCCC AACTATTTCG TCTTGAATAT CGCGCCGGAA
CAGGTGGCGC CGGTACAGGC ATTTTTGGCC GAACACCAGG TCGCGCCGCA AACCTTCTAC
CCGATTATTC GCGCGCGGCT GACTGAAATT AACGGCCGGA AATCTACGGA TGTGATCCGT
GAAAACGACC CCGGCGGCGA GACGGTCAAT CGTGAACTGA ACCTGACCTG GCTGGCGACG
CTGCCGGCGC ATAATCCACT GCTGGCCGGC GCTTGGCCGC CTAAACCCGG CGAAGTGTCT
ATCGAGCAGG GCGTAGCCAA GCGTCTGGGG GTGAATATCG GCGATACCCT GACGTTTACC
GGCGATACCC AGCCGTTCAG CGCGCGGGTT TCCAGCCTTA GACAAGTGGA CTGGGAGAGC
CTGCGCCCTA ACTTCTTTTT CATCTTTCCC CCAGGCGATC TGGCTGCTCA GCCGCAATCC
TTCCTGACCA GCTTTCGCCA CGACGGCGGC GATAATCTGA TAGCCCAATT GAACCGCCAG
TTTCCGACGC TGACGGTGTT GGACGTCGGC GCCATCCTGA AACAGATTGG CCAGGTGTTG
CAGCAGGTCG GTCTGGCGCT GGAAGTGATG GTGGTTCTGG TGATCGTCTG CGGCGCGTTG
CTGCTGCTGG CGCAGATTCA GGTGGGAATG CGGCAACGTC GCCAGGAACT GCTGGTGTAC
CGCACGTTGG GCGCCAGCCA TCGTTTGCTG CGCGGCACCC TGTGGTGGGA GTTCGCGGTG
CTGGGGCTGG CGGCCGGCGT GGCGGCGGCG ATCGGCGCGG AGGTGGCATT ATGGTTGCTG
CAGCGCCGGG TATTTGATTT CCCCTGGCAG CCTAACGGGT GGCTGTGGGT CGGTCTACCG
CCGTTGGCGG CGCTGTTGTT GTCGCTATGC GGCGGCTGGC TGGGGTTGCG CCTGCTGCGC
GGCAGAGCGC TGTTCCGCCA GTACAACGCC TGA
 
Protein sequence
MIWRWFWREW RSPSLLIVWV ALTLSVACVL ALGTLSDRMD KGLSQQSRDF LAGDRVLRAA 
RPVDELWLQQ AGQQGLTVSR QVSFMTMTYA GDNAQLAQVK AADERYPLYG ELQTRPAGLR
ASAGHALVAP RLLALLNLKV GDHLDVGDTT LRIAGELVQE PDAGFNPFDT APRVLISMAD
VEKTGAVQPG GRITWRYMFA GDARQIARFG DIVTPQLKPD QRWYGVEDSQ NALGKTLQRA
QQFLLLSALL TLLLSVAAVA VAMGHYCRSR YDLVAILKTL GAGRQALRKL IVGQWLSLLL
FSGVCGSVLG LAGEAVLMTL LAPVLPAALP AAGLWPWGWA LGSLVLISLL VGWRPYRLLL
ATQPLRVLRQ DVTARGWPLR YYLPTAVGVV IALLAAISGG GALLWSLLGG VLAVSALLAA
IGWGGLLLLR RLTLKRLALR LAVNRLLRQP WETLGQLAAF SLSFMLLALL LLLRGDLLER
WQQQLPPGSP NYFVLNIAPE QVAPVQAFLA EHQVAPQTFY PIIRARLTEI NGRKSTDVIR
ENDPGGETVN RELNLTWLAT LPAHNPLLAG AWPPKPGEVS IEQGVAKRLG VNIGDTLTFT
GDTQPFSARV SSLRQVDWES LRPNFFFIFP PGDLAAQPQS FLTSFRHDGG DNLIAQLNRQ
FPTLTVLDVG AILKQIGQVL QQVGLALEVM VVLVIVCGAL LLLAQIQVGM RQRRQELLVY
RTLGASHRLL RGTLWWEFAV LGLAAGVAAA IGAEVALWLL QRRVFDFPWQ PNGWLWVGLP
PLAALLLSLC GGWLGLRLLR GRALFRQYNA