| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd703_1053 |
|---|
| Symbol | |
|---|
| ID | 8087608 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dickeya dadantii Ech703 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012880 |
|---|
| Strand | - |
|---|
| Start bp | 1210835 |
|---|
| End bp | 1211611 |
|---|
| Gene Length | 777 bp |
|---|
| Protein Length | 258 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 644835129 |
|---|
| Product | short chain dehydrogenase |
|---|
| Protein accession | YP_002986680 |
|---|
| Protein GI | 242238499 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAAAAAG CGGTTTTGAT TACCGGCTGC TCCAGCGGCA TAGGACTGAT TGCCGCCCAG
TATCTGCAAC AACGCGGTTA TCGCGTGTTG GCGGCCTGCC GCCGCCCCGA AGATGTGGCG
CGCATGAATA CACTGGGTTT TGAAGGGATC GATCTGGATT TAGATAACAG CGCCAGCGTC
AAGCAGGCGG CTGCTGCCGT GATCGCCCTG ACAGGCAACC GGCTGTACGG ATTGTTTAAT
AACGCCGGCT ATGGCCTGTA CGGCCCGCTG AGCACCATCA CCCGGCGGCA ACTGGAACAA
CAGTTTTCCA GTAATCTGTT CGGCACGCAC CAACTGACCC AACTGCTGCT GCCGGCCATG
CTGCCGCATG GCGAAGGCCG CATCATCCAG ACCAGTTCCG TGATGGGGTT GATCTCCACG
CCCGGCCGCG GCGCCTACGC GGCCAGCAAA TACGCGCTGG AAGCCTGGTC CGACGCACTG
CGGATGGAAC TGCACGGCAG CGGCATCCGC GTTTCCCTGA TTGAACCCGG CCCGCTGACC
ACCCGGTTTA CCGACAACGT CAGCCAGACC CGCCAGGAAA AACCGGTGAC TAACCCCGGT
ATCGCCCGGC GCTTTACCCT GCCGCCGGAA GCCGTGCTGC CCAAGTTGTT GCACGCACTG
GAAAGCCCGC GGCCGCGCCT GCGCTACCCT GTCACCGTGG TCGCCCACGC CATGAGCGTA
CTACGCCGGG TCTTGCCCGG CTGCGCGCTG GATTACCTGT TGCGGACAAA ATCCTGA
|
|---|
| Protein sequence | MQKAVLITGC SSGIGLIAAQ YLQQRGYRVL AACRRPEDVA RMNTLGFEGI DLDLDNSASV
KQAAAAVIAL TGNRLYGLFN NAGYGLYGPL STITRRQLEQ QFSSNLFGTH QLTQLLLPAM
LPHGEGRIIQ TSSVMGLIST PGRGAYAASK YALEAWSDAL RMELHGSGIR VSLIEPGPLT
TRFTDNVSQT RQEKPVTNPG IARRFTLPPE AVLPKLLHAL ESPRPRLRYP VTVVAHAMSV
LRRVLPGCAL DYLLRTKS
|
|---|
| |