| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd703_1031 |
|---|
| Symbol | |
|---|
| ID | 8087586 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dickeya dadantii Ech703 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012880 |
|---|
| Strand | - |
|---|
| Start bp | 1179924 |
|---|
| End bp | 1182665 |
|---|
| Gene Length | 2742 bp |
|---|
| Protein Length | 913 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 644835107 |
|---|
| Product | copper-translocating P-type ATPase |
|---|
| Protein accession | YP_002986658 |
|---|
| Protein GI | 242238477 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG2217] Cation transport ATPase |
|---|
| TIGRFAM ID | [TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC
[TIGR01511] copper-(or silver)-translocating P-type ATPase
[TIGR01525] heavy metal translocating P-type ATPase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCGCAAA CCGTTTTGTT ATCGCTCCAG GGATTATCCT GCGAGCATTG CGTCGGCAGA
GTTAAAAAGG CGCTGGAATC ACGCCCTGAC GTGGAAAAAG CTGACGTATC ATTGACCTAC
GCCAACGTTA CCGGCGAAGT GGGCAGCTCG GCGCTGATAG ACACCATCGT TCAAGCCGGG
TATGAAGCCA GCCCGGCCAC TACGCCGGAC ACCACGTTGT CGCTCTCCGG CCTCAACTGT
CAGCATTGCG TCGCCTCGAC CCGCAAGGCG CTGGAAGCGG TCGCTGGCGT CAGCGCCGTA
GACGTCTCGC TGGAACAGGC CCGGATTTAC GGCAGCGCCG ATGCGCAAAC ACTGGTCAGC
GCCGTCGAGC AGGCCGGATT TCATGCAGCC CCGGCAGAGG CGTCTTCACT CCCAAAATCT
GAGCCGCTGG CACCGACAGA CGCTTCGCCG GAGCACCTGT CAGCGGCATC TGCAACACAT
CCGGCCAACA CCGTCTCCGG CAACGATGAC GACAGCGTAC AGCTCTTGCT GGAAGGCATG
AGCTGCGCCA GTTGCGTCGC CCGGGTACAA CAGGCGCTGC AAAACGTTCC CGGCGTGACG
CAAGCGCGCG TCAATCTGGC CGAGCGCAGC GCGCTGGTCA GCGGAAATGC GCCGCATCAG
GCCCTGATTA GCGCAGTGGA AAACGTCGGG TACGGCGCCG AAATTATTTT AGACGAGGCG
GAACGCCGCA CCCGACGCGA ACAGACCGCC CAGGCAGCCA TGCGCCGCTT CCGCTGGCAA
GCGGCATTGG GGATGCTGTT AGGCATTCCG CTGATGCTAT GGGGTCTCTT TGGCGACGGC
ATGATGCTGA CCGACAGCAA CCGCGCCGGC TGGCTGGCGA TCGGCGTACT GACGCTGGCG
GTGATGGCGA TCGCCGGCAA CCATTTCTAC CGCAATGCCT GGCGCAGCCT GCGCAACGGC
AGCGCCACCA TGGATACGCT GGTGGCGCTG GGCACCGGCG TAGCCTGGCT TTACTCCATC
ACCGTCAACC TGTGGCCCGA CAAGTTTCCG ATGGAAGCAC GCCACCTGTA TTACGAAGCC
AGCGCCATGA TCATCGGGTT AATCAACCTC GGCCATGCGC TGGAACAAAA TGCCCGCCAG
CGTTCATCGC AGGCGCTGGA ACGTCTGCTC GACCTGACGC CGCCGACGGC CAGGCTGGTC
ACGCCGCAGG GCGATCGCCA AATTCCGCTG TCCGAGATCC AGGCAGGGAT GCGCCTGCGG
CTGACCACCG GCGACCGCGT CCCGGTCGAC GGCTGCATTG AACAGGGCGA ACTATGGCTG
GACGAAGCCA TGCTGACCGG GGAGCCGCTC CCACAGCAAA AAAACGGCGG TGATACTCTC
CACGCCGGGA CTCAGGTTCA GGATGGCAGC GCGATTTTCC AGGCGCAGGC TATCGGCAAT
CAAACGACGC TGGCTCGGAT CATCCGGCTG GTGCGTCAGG CACAGAGCAG CAAGCCGGCG
ATCGGGCAAC TGGCGGATCG CATCTCGGCC GTCTTTGTCC CCGTCGTGGT GGCGATCGCA
TTGCTGAGCG GCGCCATCTG GTATGCCGTC GGGCCGGAGC CCCGGCTGGT TTATACGCTG
GTTATCGCCA CTACCGTACT GATTATCGCC TGCCCTTGCG CACTGGGCCT GGCCACGCCG
ATGTCGATCA TTGCCGGCGT TGGCCGGGCG GCAGAACTTG GCGTTCTGGT CAGGGATGCC
GACGCGCTGC AACAGGCCAG CCAACTGGAT GTTCTGGTGT TCGATAAAAC CGGCACGCTG
ACGGAAGGGA AACCCCGCGT GGTCGCCATC CATACATTTG GCGGCGCCAG CGAACAGCAG
GTGCTGGCGT GGGCGGCCTC GCTGGAACAA GGCGCCAGCC ACCCGCTGGC GCGAGCCATC
GTCGAACGTG CGCAGGGCGT TCCGCTACAC ATCATTGAGA CATTCCGCAC CCTGCCGGGG
CTCGGCATCA GCGGTCAGTG CGGAACAGTC GAGCTGCTGC TGGGCAATCC GGCGTTACTG
ACCCAACATG GCATCAACCT GACGGCGCCG ACGGGTGAAC GCTCGCCGCA GCAAAGCCTG
GAACAGTTGG CGCAGCAAGG GATCACACCG GTGTTGCTGG CGGCGGACAA CAACGTCGTG
GCGCTGTTCG CTATTCAGGA CACCTTACGG CAGGACAGCA TCCCCGCGCT GAAACGCCTG
CATCGCCAGG GTTATCAACT GGTGATGCTG ACCGGCGACA ACCCGGCCAC CGCCCACGCC
ATCGCGCAGG TAGCCGGTAT CGATCAGGTT ATCGCCGGCG TTCTGCCAGA CGGCAAAGCC
GATGCCATCC GGCAGTTGCA GGCGGGCGGA CGGAAAGTCG CGATGATCGG CGACGGCATC
AACGATGCCC CGGCACTGGC GCAGGCGGAT GTCGGCATCG CCATGGGCGG CGGCAGCGAT
ATCGCGGTGG AAACTGCGAC CATGGCGCTG ATGCGTCACA GTCTGCAAGG TGTGGCGGAT
GCGCTTGAAC TGTCGAAAGC CACGCTGGGC AACATGAAGC AGAACCTGCT GGGCGCCTTC
GTCTATAACT CGCTGGGGAT CCCCATCGCC GCCGGTTTAC TCTACCCGTT TACCGGCACC
TTGCTCAGCC CGGTGGTGGC GGGCGCGGCC ATGGCACTGT CCTCCATCAC CGTGGTCAGC
AATGCCAACC GGTTACTGCG TTTTTCACCC GGCGCCAGAT AA
|
|---|
| Protein sequence | MSQTVLLSLQ GLSCEHCVGR VKKALESRPD VEKADVSLTY ANVTGEVGSS ALIDTIVQAG
YEASPATTPD TTLSLSGLNC QHCVASTRKA LEAVAGVSAV DVSLEQARIY GSADAQTLVS
AVEQAGFHAA PAEASSLPKS EPLAPTDASP EHLSAASATH PANTVSGNDD DSVQLLLEGM
SCASCVARVQ QALQNVPGVT QARVNLAERS ALVSGNAPHQ ALISAVENVG YGAEIILDEA
ERRTRREQTA QAAMRRFRWQ AALGMLLGIP LMLWGLFGDG MMLTDSNRAG WLAIGVLTLA
VMAIAGNHFY RNAWRSLRNG SATMDTLVAL GTGVAWLYSI TVNLWPDKFP MEARHLYYEA
SAMIIGLINL GHALEQNARQ RSSQALERLL DLTPPTARLV TPQGDRQIPL SEIQAGMRLR
LTTGDRVPVD GCIEQGELWL DEAMLTGEPL PQQKNGGDTL HAGTQVQDGS AIFQAQAIGN
QTTLARIIRL VRQAQSSKPA IGQLADRISA VFVPVVVAIA LLSGAIWYAV GPEPRLVYTL
VIATTVLIIA CPCALGLATP MSIIAGVGRA AELGVLVRDA DALQQASQLD VLVFDKTGTL
TEGKPRVVAI HTFGGASEQQ VLAWAASLEQ GASHPLARAI VERAQGVPLH IIETFRTLPG
LGISGQCGTV ELLLGNPALL TQHGINLTAP TGERSPQQSL EQLAQQGITP VLLAADNNVV
ALFAIQDTLR QDSIPALKRL HRQGYQLVML TGDNPATAHA IAQVAGIDQV IAGVLPDGKA
DAIRQLQAGG RKVAMIGDGI NDAPALAQAD VGIAMGGGSD IAVETATMAL MRHSLQGVAD
ALELSKATLG NMKQNLLGAF VYNSLGIPIA AGLLYPFTGT LLSPVVAGAA MALSSITVVS
NANRLLRFSP GAR
|
|---|
| |