| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd703_0952 |
|---|
| Symbol | |
|---|
| ID | 8090094 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dickeya dadantii Ech703 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012880 |
|---|
| Strand | - |
|---|
| Start bp | 1086423 |
|---|
| End bp | 1087370 |
|---|
| Gene Length | 948 bp |
|---|
| Protein Length | 315 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 644835026 |
|---|
| Product | binding-protein-dependent transport systems inner membrane component |
|---|
| Protein accession | YP_002986581 |
|---|
| Protein GI | 242238400 |
|---|
| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.24114 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAGCGCGA GTTATCTGTT AAAACGCCTG CTGTTGGTGA TCTACACCCT GTTGGTGGTG
TCCGTGCTGG TGTTCGGCAT TACCCAGTTG CTGCCTGCCG ATGCGGCGGT CACGCTGCTC
GGCCAGCACG CCACCCCCGA GGCGCTGGCG GCAGTCAGGG AACGCCTCGG GCTGGACGCG
CCCGCCTGGG TGCAATACGG GCACTGGCTG GCGGCGGCGT TGCACGGCGA TTTCGGTGTC
TCCATGCGCA CCAATTTGCC GGTCGCGCCC ACGTTGCTCA CGGCGTTGTC CCGTTCGCTG
CTGCTGGCGG CGTGCGCCCT GTCGCTGATG CTGCTGGTGG CGCTGCCGCT CGGCGTCTGG
GCGGCGGTCA GAAAAGGCAA ACTGGCGGAT GTGTTGGTCA GCGTGCTGTC CTACATCGGT
ATTTCCTTTC CCGAGTTCGT CACCGCCACG CTGATGTTGC TGCTGTTCGC CGATATCTGG
CAGTTGTTGC CGGCGACCGG TTACGTCCCG CTCAGCGAGA GCCTGATTGA CGGCGTGCGC
CATCTGGTGC TGCCGTCGGC GACGGTAGCG ATGATTCTGG TGGCGCATGT CTCACGCATG
GTGCGCTCGG AAATGGTGGA CGTGCTGCAT ACTGACTATA TCCGGGCGGC CTGGCTGAAA
GGGCTGTCGC GGCGGCGCAT CCTGTGGCGG CACGCGCTGC GCAACGGCCT GTTGCCGGCC
ATCACCATCG TGGCGCTGGA CGTCGGTTAT CTGCTGGGCG GCATCGTGGT GGTGGAAGAG
ATTTTCGCCA TTCCCGGCAT CGGCCGAGAG CTTATCGTCG CGGTGCAGGC GCGTGACCTG
CCCACCCTTC AGGGCGGCGT CATGATCCTG GCCTCCACCT ATGCGGTCGT TAATTTTCTG
GCCGACCTCG CCTACGCCAT GCTAGACAAG CGGATTCACT ATGTTTGA
|
|---|
| Protein sequence | MSASYLLKRL LLVIYTLLVV SVLVFGITQL LPADAAVTLL GQHATPEALA AVRERLGLDA
PAWVQYGHWL AAALHGDFGV SMRTNLPVAP TLLTALSRSL LLAACALSLM LLVALPLGVW
AAVRKGKLAD VLVSVLSYIG ISFPEFVTAT LMLLLFADIW QLLPATGYVP LSESLIDGVR
HLVLPSATVA MILVAHVSRM VRSEMVDVLH TDYIRAAWLK GLSRRRILWR HALRNGLLPA
ITIVALDVGY LLGGIVVVEE IFAIPGIGRE LIVAVQARDL PTLQGGVMIL ASTYAVVNFL
ADLAYAMLDK RIHYV
|
|---|
| |