| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd703_0909 |
|---|
| Symbol | |
|---|
| ID | 8090050 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dickeya dadantii Ech703 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012880 |
|---|
| Strand | + |
|---|
| Start bp | 1039332 |
|---|
| End bp | 1039988 |
|---|
| Gene Length | 657 bp |
|---|
| Protein Length | 218 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 644834983 |
|---|
| Product | polar amino acid ABC transporter, inner membrane subunit |
|---|
| Protein accession | YP_002986539 |
|---|
| Protein GI | 242238358 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0765] ABC-type amino acid transport system, permease component |
|---|
| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.436863 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATGACGT TTACCGACTG GGATATCGTG CGCAACCTGC TGCTGGCGGG GCGCTGGACG
CTGCTGTTGT CGCTGGCAGC CTTTTTTGGC GGCGGTCTGG TCACGCTGCC CTTGTTGCTG
CTGCGTCTGA CCAAACGCCC GTGGCCGCTG CGCCTGACCC GGCTGTACGC CGATGTGTTT
CAGGGCACGC CGCTGCTGAT GCAGCTGTTT TTGGCGTTCT TCGGCCTGGG GTTGTTCGGC
ATCGACGTCA GCCCCTGGAC GGCGGCGGCG CTGGCGCTGA CGCTGTTCAC CAGTGCGTTT
CTGGTGGATA TCTGGCACGG CAGCGTGCTG GCGCTGCCGA AAGGGCAGTG GGAAGCCTGT
CGTTGCCTCG GGCTGACCTT CACCCAGACG CTGACCCGGG TGGTTGCCCC GCAGGCGATG
CGTATCGCCA TCGCGCCGAC GGTGGGGTTT TCAGTGCAAG TGATCAAGGG CACCGCACTG
GCTTCGATCA TCGGCTTCGT CGAGCTGACC AAGGCCGGCA CCATGCTCAA CAACGTGACC
TTCCAGCCGT TCAAGGTGTT CGGGCTGGTG GCGCTGGGCT ATTTCCTGCT GTGTTACCCG
CTCTCTTACT ACAGCCGTTA TCTGGAGAAG AAATTCAATG CCGCTCATCA CCATTAA
|
|---|
| Protein sequence | MMTFTDWDIV RNLLLAGRWT LLLSLAAFFG GGLVTLPLLL LRLTKRPWPL RLTRLYADVF
QGTPLLMQLF LAFFGLGLFG IDVSPWTAAA LALTLFTSAF LVDIWHGSVL ALPKGQWEAC
RCLGLTFTQT LTRVVAPQAM RIAIAPTVGF SVQVIKGTAL ASIIGFVELT KAGTMLNNVT
FQPFKVFGLV ALGYFLLCYP LSYYSRYLEK KFNAAHHH
|
|---|
| |