| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd703_0897 |
|---|
| Symbol | |
|---|
| ID | 8090038 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dickeya dadantii Ech703 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012880 |
|---|
| Strand | - |
|---|
| Start bp | 1026876 |
|---|
| End bp | 1028078 |
|---|
| Gene Length | 1203 bp |
|---|
| Protein Length | 400 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 644834971 |
|---|
| Product | glycine betaine/L-proline ABC transporter, ATPase subunit |
|---|
| Protein accession | YP_002986527 |
|---|
| Protein GI | 242238346 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG4175] ABC-type proline/glycine betaine transport system, ATPase component |
|---|
| TIGRFAM ID | [TIGR01186] glycine betaine/L-proline transport ATP binding subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCAATTA AACTTGAAAT AAAGTCTCTG TATAAAATAT TTGGCGACCA CCCTGACCGG
GCATTTAAAC TTATCGATAA AGGCCTGAAC AAAGATCAGA TTTTCAAAAA AACCGGTCTG
ACCGTCGGGG TGAAAAATGC CAGTCTGGCC ATTGAAGAAG GCGAGATTTT CGTGATCATG
GGATTATCCG GTTCCGGTAA ATCCACGCTG GTACGCCTTC TCAATCGCCT GATCGAACCG
ACCCGCGGGC AAGTGCTGAT CGACGACGAG GATATCTCCC GTCTGCCCGA CAGTGCGCTA
CGTGAGGTTC GGCGTAAAAA AATCAGCATG GTGTTTCAGT CGTTCGCGCT GATGCCCCAT
CTCAATATTC TCGACAATAC CGCCTTCGGC ATGGATCTGG CCGGGGTGCA GCGCGCCGAA
CGCGAACAGA AGGCGATCAG CGCGCTGCAA CAGGTTGGGC TGGAAACCTA TGCCCACGCC
TATCCCGACG CGCTCTCCGG CGGCATGCGC CAGCGCGTCG GTCTGGCGCG GGCATTGGCC
AACGACCCGG ACATCCTGCT GATGGACGAG GCGTTTTCGG CGCTCGACCC GTTGATTCGT
ACCGAGATGC AGGACGAGTT GATCCGCCTG CAGGCGCGAC AACAACGCAC AATCGTCTTT
ATTTCCCACG ATCTCGACGA AGCGATGCGC ATCGGCGATC GCATCGCCAT CATGCATAGC
GGCGAAGTGA TTCAGGTCGG TACGCCGGAT GAGATCCTCA ACAACCCGGC GAACGATTAT
GTCCGCGCCT TTTTCCGCGG CGTAGACGTC AGCCAGGTGT TCAGCGCCGG CGATATCGTC
CGCCGTCGGC CCGTGGCGTT GATCCGTAAA ATTCCGGGCG TAGGGCCGCG TTCAGCATTG
AAGATATTGC AGCAAGAAGA TCGCGAGTAC GGCTATGTGC TGGAGCGCGG TCAGAAATTT
ATCGGCGTCG TTTCCCTCGA TTCACTCAAA CAAGCGCTGC AGGCACAACA GCCGTTGGAG
CAGGCATTGT TGCCCGCGCC GGCGGCCGTC TCCGCCAGCA TGCCGCTCAG CGAACTGATC
TCTCAGGTGG CGCAGGCGCC CTGTGCGGTG CCGGTCGTCG GAGAACACCA TGAATATCTT
GGCATCATCT CCAAAGGGAT GTTGCTGCAG GCGCTGGATA AGGAGGGCTC GCTAAATGGC
TGA
|
|---|
| Protein sequence | MAIKLEIKSL YKIFGDHPDR AFKLIDKGLN KDQIFKKTGL TVGVKNASLA IEEGEIFVIM
GLSGSGKSTL VRLLNRLIEP TRGQVLIDDE DISRLPDSAL REVRRKKISM VFQSFALMPH
LNILDNTAFG MDLAGVQRAE REQKAISALQ QVGLETYAHA YPDALSGGMR QRVGLARALA
NDPDILLMDE AFSALDPLIR TEMQDELIRL QARQQRTIVF ISHDLDEAMR IGDRIAIMHS
GEVIQVGTPD EILNNPANDY VRAFFRGVDV SQVFSAGDIV RRRPVALIRK IPGVGPRSAL
KILQQEDREY GYVLERGQKF IGVVSLDSLK QALQAQQPLE QALLPAPAAV SASMPLSELI
SQVAQAPCAV PVVGEHHEYL GIISKGMLLQ ALDKEGSLNG
|
|---|
| |