| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd703_0872 |
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| Symbol | |
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| ID | 8090008 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dickeya dadantii Ech703 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012880 |
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| Strand | + |
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| Start bp | 994982 |
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| End bp | 995974 |
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| Gene Length | 993 bp |
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| Protein Length | 330 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 644834943 |
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| Product | RNA polymerase sigma factor RpoS |
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| Protein accession | YP_002986504 |
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| Protein GI | 242238323 |
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| COG category | [K] Transcription |
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| COG ID | [COG0568] DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) |
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| TIGRFAM ID | [TIGR02394] RNA polymerase sigma factor RpoS
[TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGCCAAA GCACGCTGAA AGTTAACGAG TTACATGAAG ATGCTGATTT CGAAGAGAAT
GGAGTCGATG TTTTTGACGA AAAAGCGTTG GCAGAAGAAG AAACCAGCGA TAGCGAATTA
CTAGAGGATG ATCTGCTATC GCAGGGAACA GCCCAACGTG TCCTGGATGC AACCCAGTTG
TATCTGGGGG AAATTGGCTA TTCACCCCTG TTGACCGCTG AAGAAGAGGT TTATTTCGCT
CGGCGGGCAT TACGTGGTGA TGTCTCATCG CGTCGCCGTA TGATTGAAAG CAATCTACGG
TTGGTAGTAA AAATCGCCCG TCGTTACAAT AATCGGGGTC TGGCCTTGCT GGATCTGATT
GAAGAAGGCA ACCTCGGTTT GATTCGAGCG GTCGAAAAGT TCGACCCCGA ACGCGGTTTT
CGCTTTTCAA CTTATGCGAC ATGGTGGATC AGGCAAACCA TTGAGCGGGC TATTATGAAT
CAGACCCGCA CTATCCGTTT ACCTATCCAT ATTGTCAAAG AATTGAACGT TTATCTGCGC
ACTGCTCGCG AACTATCCCA CAAACTGGAT CACGAACCCA GCGCGGAAGA GATTGCTGAG
AGGCTGGATA GGCCGGTTGA TGACGTGAAC CGAATGCTGC GTCTGAATGA GCGCATTACG
TCTGTCGATA CACCGCTCGG TGGCGATTCC GATAAAGCGT TACTGGATAT TCTGGCAGAT
GAGAAGGATA ACGGGCCGGA AGATACCACC CAAAACAACG ATATGAAGCA GAATATCGTC
AAGTGGCTGT TCGAGCTGAA CGCTAAACAA CGGGAGGTGC TTGCCCGTCG TTTTGGCCTA
CTGGGGTATG AGGCTGCGAC GCTTGAGGAT GTGGGCCGGG AGATTGGTTT GACTCGTGAG
CGTGTACGTC AAATCCAGGT TGAAGGGCTG CGTCGTCTTC GTGAAATATT GCAGACTCAG
GGACTGAATA TCGAAGAGCT ATTTCGCGAA TAA
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| Protein sequence | MSQSTLKVNE LHEDADFEEN GVDVFDEKAL AEEETSDSEL LEDDLLSQGT AQRVLDATQL
YLGEIGYSPL LTAEEEVYFA RRALRGDVSS RRRMIESNLR LVVKIARRYN NRGLALLDLI
EEGNLGLIRA VEKFDPERGF RFSTYATWWI RQTIERAIMN QTRTIRLPIH IVKELNVYLR
TARELSHKLD HEPSAEEIAE RLDRPVDDVN RMLRLNERIT SVDTPLGGDS DKALLDILAD
EKDNGPEDTT QNNDMKQNIV KWLFELNAKQ REVLARRFGL LGYEAATLED VGREIGLTRE
RVRQIQVEGL RRLREILQTQ GLNIEELFRE
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