| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd703_0869 |
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| Symbol | truD |
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| ID | 8090005 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dickeya dadantii Ech703 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012880 |
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| Strand | + |
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| Start bp | 991658 |
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| End bp | 992731 |
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| Gene Length | 1074 bp |
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| Protein Length | 357 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 644834940 |
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| Product | tRNA pseudouridine synthase D |
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| Protein accession | YP_002986501 |
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| Protein GI | 242238320 |
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| COG category | [S] Function unknown |
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| COG ID | [COG0585] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR00094] tRNA pseudouridine synthase, TruD family |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTGATGG CGGCAGTCGA TGAGGCTCTG TTCTGGCTCC ACGGGCACCC CCTGGCCTCA
GGGGTGTTGA AAGCGGCGCC AGAGGACTTT GTCGTCATGG AAGATCTCGG GTTTGCGCTG
GATGGCGACG GCGAACATGT GTTGTTGCGG ATGAGGAAGC GTGGCTGCAA TACGGTTTTC
GTCGCCGAAG CGCTGGCCAA ATTTGCCGGC ATTCCGGCTC GTTCTGTGAG CTACGCTGGG
CTGAAAGATC GTCATGCCGT CGCTGAGCAG TGGTTTTGCC TGCATATGCC CGGAAAAGCG
GAACTGGACT GGTCATCATT TACGCTGGAA GGATGTGAGA TTCTTGAAGC GACCAGACAT
CGTCGTAAAC TGCGCACCGG CGCGCTGAAA GGCAATGCCT TCACGTTGGT GCTGCGGCAT
ATCAGCAATA CTGCGGATGT GGATGCTCGG CTTAGTCTGA TCGCCCGCCA TGGCGTTCCC
AATTATTTCG GCAATCAGCG ATTCGGCCGC GAAGGAAATA ATCTGGTTCA GGCGCTGCGC
TGGGCCAATG ACGAAATCCG TATCAGGGAA CGCAGCAAGC GCAGTTTCTA TCTCTCCGCC
GCCCGTAGTG AGCTGTTTAA TCAGGTTGTC AGCAAACGTC TGGCGGCTTA TGGCGTTGGA
ACAGTGTTTT GCGGCGATGC GTTGCAGCTA AGCGGTCGCG GCAGCTGGTT TGTGGTTAAA
CCGGAGGAGC TCGACAGCGT TGAACCACGG GTGGCTGCCG GAGAGTTGCA GATAACCGCT
CCCCTTCCTG GCGATGGCGA ACCGGGAACA CAGGGTGACG CATTGGCGTT CGAACTGGAC
TGTCTGTCGC ATCATGCCGC ATTGTTGTCT CTGCTACGGC GCGAGCGTGT GGAGCCCGCC
AGACGTGCCA TCATGCTTTA TCCGCAGCAT ATGACATGGT CGTGGCTTGA CGAGCAGACG
CTGGAACTTG GCTTTTGGTT GCCGGCCGGT TGTTTCGCCA CCAGCGTGGT GAGAGAACTG
GTGTGTGAGC GGGTACAGAA TGCCGACGAG CATCGGGAAA ACGTTGTCGG TTGA
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| Protein sequence | MVMAAVDEAL FWLHGHPLAS GVLKAAPEDF VVMEDLGFAL DGDGEHVLLR MRKRGCNTVF
VAEALAKFAG IPARSVSYAG LKDRHAVAEQ WFCLHMPGKA ELDWSSFTLE GCEILEATRH
RRKLRTGALK GNAFTLVLRH ISNTADVDAR LSLIARHGVP NYFGNQRFGR EGNNLVQALR
WANDEIRIRE RSKRSFYLSA ARSELFNQVV SKRLAAYGVG TVFCGDALQL SGRGSWFVVK
PEELDSVEPR VAAGELQITA PLPGDGEPGT QGDALAFELD CLSHHAALLS LLRRERVEPA
RRAIMLYPQH MTWSWLDEQT LELGFWLPAG CFATSVVREL VCERVQNADE HRENVVG
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