Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dd703_0845 |
Symbol | garR |
ID | 8089981 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dickeya dadantii Ech703 |
Kingdom | Bacteria |
Replicon accession | NC_012880 |
Strand | + |
Start bp | 961735 |
End bp | 962619 |
Gene Length | 885 bp |
Protein Length | 294 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 644834916 |
Product | tartronate semialdehyde reductase |
Protein accession | YP_002986477 |
Protein GI | 242238296 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG2084] 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases |
TIGRFAM ID | [TIGR01505] 2-hydroxy-3-oxopropionate reductase [TIGR01692] 3-hydroxyisobutyrate dehydrogenase |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAATTG GATTTATTGG GCTGGGCATT ATGGGTAAAC CGATGAGCAA AAACCTGATC AAGGCAGGTT ACTCATTGGT GGTGCTGGAT CGTAATACCG AAGCCGTTGC CGAAGTGGTC GCCGCAGGCG CTAGCGCCGC CGCCACGCCG AAGGAAGTGG CTGAGCAGAG CGACATCATC GTCACCATGC TGCCCAATTC ACCGCATGTG AAAGAGGTGG TACTGGGCGA AAACGGCATT ATCGAGGGCG CCCGTAAAGG GACGATTGTG GCCGATATGA GTTCTATCGC GCCGCTGGCC AGCCGTGAAA TTGCCGCCGC GCTGGCGGAA AAAGGCGTCG ACATGCTGGA CGCGCCGGTA AGCGGCGGCG AGCCGAAAGC CATCGACGGC ACGCTGTCCG TGATGGTCGG CGGCGACAAA GCGATTTTCG ACCGCTGCTA TGACGTATTA AAAGCGATGG CCGGCTCCGT GGTGCATACC GGCGACGTCG GCGCGGGTAA CGTCACCAAA CTGGCCAACC AGGTCATCGT GGCGCTGAAT ATCGCCGCCA TGTCCGAAGC GCTGGTGCTG GCGACCAAAG CCGGCGTGAA CCCGGATCTG GTGTATCAGG CGATTCGCGG CGGATTGGCC GGCAGCACCG TATTGGACGC CAAAGCGCCG ATGGTGATGG ATCGCAACTT CAAACCGGGT TTCCGTATCG ATCTGCATAT CAAGGATCTG GCGAACGCGC TGGATACGTC TCATGGCGTG GGCGCGCAGT TGCCGCTGAC GGCGGCGGTG ATGGAAATGA TGCAGGCGCT GAAAGCCGAC GATCTCGGCT CTGCCGACCA CAGTGCGCTG GCTCGTTACT ACGAGAAGCT GGCCAAGGTT GAAGTGACTC GATAG
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Protein sequence | MKIGFIGLGI MGKPMSKNLI KAGYSLVVLD RNTEAVAEVV AAGASAAATP KEVAEQSDII VTMLPNSPHV KEVVLGENGI IEGARKGTIV ADMSSIAPLA SREIAAALAE KGVDMLDAPV SGGEPKAIDG TLSVMVGGDK AIFDRCYDVL KAMAGSVVHT GDVGAGNVTK LANQVIVALN IAAMSEALVL ATKAGVNPDL VYQAIRGGLA GSTVLDAKAP MVMDRNFKPG FRIDLHIKDL ANALDTSHGV GAQLPLTAAV MEMMQALKAD DLGSADHSAL ARYYEKLAKV EVTR
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