| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd703_0843 |
|---|
| Symbol | |
|---|
| ID | 8089979 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dickeya dadantii Ech703 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012880 |
|---|
| Strand | + |
|---|
| Start bp | 959375 |
|---|
| End bp | 960715 |
|---|
| Gene Length | 1341 bp |
|---|
| Protein Length | 446 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 644834914 |
|---|
| Product | glucarate dehydratase |
|---|
| Protein accession | YP_002986475 |
|---|
| Protein GI | 242238294 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis
[R] General function prediction only |
|---|
| COG ID | [COG4948] L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily |
|---|
| TIGRFAM ID | [TIGR03247] glucarate dehydratase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCTTCAC AAAGTACCAC GCCTGTTATT ACCCGTATGC AGGTGATCCC GGTGGCCGGC
CATGACAGCA TGTTGCTGAA CCTAAGCGGG GCGCATGCGC CGTATTTCAC CCGTAACATC
GTGATTATGC AGGATAACGC GGGTAATACC GGCGTGGGTG AAATCCCTGG CGGCGAGAAA
ATCCGTCAGA CGCTGGAAGA TGCCGCTCAG TTGGTCATCG GCAAAACGCT GGGTGAATAC
AAGAATGTCA TGACCGCCGT GCGTAACCAG TTCGCCGATC GCGATGCCTC CGGTCGTGGC
CTGCAGACGT TCGACCTGCG TACCACCATC CATGTCGTGA CCGGTATCGA AGCGGCCATG
CTGGATTTGC TGGGCCAATT CCTGAATGTG CCGGTCGCCG CGCTGCTGGG CGATGGTCAA
CAGCGCGATG CGGTGGAAAT GTTGGGCTAC CTGTTCTACA TCGGCGATCG CAATAAAACC
GACCTGCCGT ATCAGAGCCA GCCGGATGAA AAATGCGACT GGTATCGTCT TCGCCATGAA
GAAGCGTTGT CGCCGGAAAC GGTGGTGCGT CTGGCGGAAG CCGCTTATGA AAAATACGGT
TTCAATGATT TCAAACTGAA GGGCGGCGTA CTGGCCGGCA GCGAAGAAGC GGAGGCGGTC
ACGGCGCTGT CCAAACGTTT CCCGCAGGCA CGTATTACGC TGGATCCAAA CGGCGCCTGG
TCGTTGGACG AAGCGATTCG TCTGGGCAAA CAACTGCGTG GCGTGCTGGC TTATGCCGAA
GACCCGTGCG GCGCGGAGCA GGGTTTCTCC GGCCGTGAAG TGATGGCGGA ATTCCGTCGC
GCCACCGGCC TGCCGACCGC GACCAATATG ATCGCTACCG ACTGGCGTCA GATGGGGCAC
ACCATCTCCT TGCAGTCGGT GGATATCCCG CTGGCGGATC CGCATTTCTG GACCATGCAA
GGCTCGGTGC GCGTTGCGCA GATGTGTCAT GAATGGGGTT TGACCTGGGG TTCGCATTCC
AACAACCATT TCGACATTTC GCTGGCGATG TTCACCCATG TCGCGGCGGC GGCTCCGGGC
CATATCACCG CCATCGACAC CCACTGGATC TGGCAGGAAG GCAACCAACG TCTGACCAAA
GAACCGTTCC AGATCGTCGG CGGCATGGTG GAAGTGCCGA AAAAACCGGG TCTGGGCGTT
GAATTGGATA TGGCGCAGGT GATGAAGGCC CATGAGTTGT ACAAAAACAT GGGGCTGGGG
GCGCGCAACG ACGCCGTCGG CATGCAGTAT CTGGTTCCCG GCTGGACGTT CGATAACAAA
CGCCCCTGTC TGGTTCGTTA A
|
|---|
| Protein sequence | MASQSTTPVI TRMQVIPVAG HDSMLLNLSG AHAPYFTRNI VIMQDNAGNT GVGEIPGGEK
IRQTLEDAAQ LVIGKTLGEY KNVMTAVRNQ FADRDASGRG LQTFDLRTTI HVVTGIEAAM
LDLLGQFLNV PVAALLGDGQ QRDAVEMLGY LFYIGDRNKT DLPYQSQPDE KCDWYRLRHE
EALSPETVVR LAEAAYEKYG FNDFKLKGGV LAGSEEAEAV TALSKRFPQA RITLDPNGAW
SLDEAIRLGK QLRGVLAYAE DPCGAEQGFS GREVMAEFRR ATGLPTATNM IATDWRQMGH
TISLQSVDIP LADPHFWTMQ GSVRVAQMCH EWGLTWGSHS NNHFDISLAM FTHVAAAAPG
HITAIDTHWI WQEGNQRLTK EPFQIVGGMV EVPKKPGLGV ELDMAQVMKA HELYKNMGLG
ARNDAVGMQY LVPGWTFDNK RPCLVR
|
|---|
| |