| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd703_0842 |
|---|
| Symbol | |
|---|
| ID | 8089978 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dickeya dadantii Ech703 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012880 |
|---|
| Strand | + |
|---|
| Start bp | 957997 |
|---|
| End bp | 959358 |
|---|
| Gene Length | 1362 bp |
|---|
| Protein Length | 453 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 644834913 |
|---|
| Product | Glucarate dehydratase |
|---|
| Protein accession | YP_002986474 |
|---|
| Protein GI | 242238293 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis
[R] General function prediction only |
|---|
| COG ID | [COG4948] L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily |
|---|
| TIGRFAM ID | [TIGR03247] glucarate dehydratase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.545959 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTAGCA CTCAGGACAC CCCAATTATT ACTGATATGA AGGTCATCCC GGTGGCCGGC
CATGACAGCA TGTTGCTGAA TATCGGCGGC GCCCACGGCG CCTACTTCAC CCGCAACATC
GTCATTTTGA CGGACAGTTC CGGTCATACC GGCGTGGGCG AAGCGCCCGG CGGCGAGGTG
ATTTACAACA CGCTGACGGC CGCCATTCCC CAGGTCGTGG GCAACCAGGT GGCGCGCATG
AACCGCCTGG TGCACCAGAT CCACAAAGGG AACCAGTCTT CCGATTTCGA CTCGTTCGGC
AAAGGCGCCT GGACGTTCGA GCTGCGGGTG AATGCGGTGG CAGCGCTGGA GGCCGCTTGT
CTGGATCTGT TGGGCCAGCA TCTGGGCGTC CCGGTCGCCG AACTGTTGGG GCCGGGCAAA
CAGCGTGATG AAGTCACTGT GCTGGGCTAC CTGTTCTACA TCGGCGATCG CACCCAAACC
GACCTGCCGT ATCTGGCGGG CGAAACCGGC GGTCACGAGT GGTACCACCT GCGCCATCAG
AAAGCGATGG ACAGCGAGGC TGTCGTCAGG TTGGCGGAAG CCTCGGCCGA TCGTTACGGC
TTCAAAGATT TCAAACTGAA AGGCGGCGTG CTGCCGGGCG AGCTGGAAAT CGACACCGTC
AAGGCGCTGA AAAAACGTTT CCCGGATGCC CGTATCACCG TCGACCCCAA CGGCGCCTGG
TTGCTGGATG AGGCGATCCG TCTGTGCCGG GACATGAAAG ATGTCCTGAC CTACGCCGAA
GATCCATGCG GTGCCGAGCA GGGCTTCTCC GGTCGCGAAG TGATGTCCGA ATTCCGGCGC
GCCACCGGTC TGCCGGTCGC CACCAATATG ATCGCCACCA ACTGGCGTGA AATGAACCAT
GCCGTGATGT TACAGGCGGT GGATATCCCG CTGGCGGATC CGCATTTCTG GACCATGCAC
GGCGCGGTGC GCGTCGCGCA GCTGTGCGAC GACTGGGGCC TGACCTGGGG TTGCCATTCC
AACAACCACT TTGATATTTC GCTGGCGATG TTTACCCATG TTGGCGCCGC GGTACCGGGA
AAACCGACCG CTATCGATAC TCACTGGATC TGGCAGGAAG GGCAGCATCT GACCAAAGAA
CCGCTGCAAA TCGTCAACGG CAAGATCAAA GTGCCGGATC GTCCGGGGCT GGGTATCGAA
CTGGATATGG AACAGGTGAT GAAGGCGCAC GAGCTGCATA AGAAACTGCC GAGCGGCGCG
CGCAATGATG CCGTCGCAAT GCAGTACCTG ATCCCCGGCT GGACGTTCGA TCGCAAACGT
CCGGTTTTCG GGCGTGAAAT CCCGGCTAAT GCCAAGTTTT AA
|
|---|
| Protein sequence | MSSTQDTPII TDMKVIPVAG HDSMLLNIGG AHGAYFTRNI VILTDSSGHT GVGEAPGGEV
IYNTLTAAIP QVVGNQVARM NRLVHQIHKG NQSSDFDSFG KGAWTFELRV NAVAALEAAC
LDLLGQHLGV PVAELLGPGK QRDEVTVLGY LFYIGDRTQT DLPYLAGETG GHEWYHLRHQ
KAMDSEAVVR LAEASADRYG FKDFKLKGGV LPGELEIDTV KALKKRFPDA RITVDPNGAW
LLDEAIRLCR DMKDVLTYAE DPCGAEQGFS GREVMSEFRR ATGLPVATNM IATNWREMNH
AVMLQAVDIP LADPHFWTMH GAVRVAQLCD DWGLTWGCHS NNHFDISLAM FTHVGAAVPG
KPTAIDTHWI WQEGQHLTKE PLQIVNGKIK VPDRPGLGIE LDMEQVMKAH ELHKKLPSGA
RNDAVAMQYL IPGWTFDRKR PVFGREIPAN AKF
|
|---|
| |