| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd703_0822 |
|---|
| Symbol | |
|---|
| ID | 8089958 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dickeya dadantii Ech703 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012880 |
|---|
| Strand | + |
|---|
| Start bp | 929816 |
|---|
| End bp | 931591 |
|---|
| Gene Length | 1776 bp |
|---|
| Protein Length | 591 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 644834893 |
|---|
| Product | surface antigen (D15) |
|---|
| Protein accession | YP_002986454 |
|---|
| Protein GI | 242238273 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0729] Outer membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.0528638 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGATTAATA ACCGCAACAA ACGCCGGCTC TGCGGCATGG CGCTTAGTCA GACGCTGATA
CTGTGCGGCG TGCTGATAAC GCCGCCGACG ATGGCGGCCT CCTCCAATGT GCGTTTGCAA
CTGCTTGGTT TGAGCGGCGA TGTGCAGAAA AACGTCAGGG CCCGGCTTTC CACCATTTCC
CCGGATGAAG TCAACGCCGA CAGCCGCTTT CGCGCCCGCG TCGACGAGGC AATCCGGCAG
GGGCTGCGTG CGATGGGCTA CTACCAGCCC GATATCCATT TCGACTTCAT CCCTGCCGAA
GGCCGGGGAC GCCCGGTGCT TAAAGTCACT GTCGATCCCG GCGAACCGGT CACTATCGCC
GGTTCCAGCA TTGCCATGCG CGGCGAAGCG CAGCATGACG AAGACTATCT GCGGCTGGTG
GCTGAACATC GTCCGAAAGT GGGGGCGGTG CTGAACCACG GCGCTTATGA CAATTTCAAA
AGCGAGCTGA ACAACCTGGC GATGCGCAAG GGGTATTTCG ACGCCCGCTT CAATAAAAGC
CAGTTGGGTG TGATGCAGTC CACTCGTCAA GCCTGGTGGG ATATCGATTA TGATAGCGGC
CCACGCTACC GCTTCGGAAA GGTGACTTTC CGCCATGCTC AGATTCAGGA GCAGTATCTG
CAGGCGCTGT TGCCGTTTCA TGAAGGCGAT GCCTATACCA CAGAGCAACT GGGCGAGTTA
AACCGGCGTT TGTCGGCCAC CGGTTGGTTT AATTCGGCGG TGGTTTCGCC GGATTTCGAG
CGGAGCCGGC AGAGTAAAGT CCTGCCGCTG GACGCGGTTC TGACGCCCCG AACCCGCAAT
AGCGTAGAAA CCGGGGTCGG GTACGCCACC GATGTCGGCC CGCGTCTGAA AACCGTCTGG
AATAAACCCT GGGTCAACAG CTACGGCCAC AGTTTCACCA ACAGCCTCAG TCTGTCCGCA
CCGGAACAGC AACTGGATAT GAGCTACAAA ATCCCGCTAC TGAAAAGCCC GCTGGAACAG
TATTACCTGG TACAAGGCGG TTTGAAGCGG GAAGACCTCA ACGATACCCA ATCCGATACC
ACCTCCTTGA ATCTGGCCCG CTACTGGGAG CTGAACAGCG GCTGGCAGCG TGCGCTCAAT
CTGCATTGGA CGTTGGATCA CTTTACGCAG GCCAGCGTCA CCAACACCAC CATGCTGATC
TACCCCGGCG TGAGCTTCAA CCGCACCCGC CAGCGCGGCG GTCTGATGCC GGACTGGGGA
GATACGCAGC GCTATTCCGT GGATGTTTCA AACACCACGT GGGGATCGGA TCTCGATTTT
GCGATCTTTC AGGCGCAGAA CGTATGGATC CGCACACTGG AGGAAAAGCA CCGTTTCGTC
GCCCGCGCCA ATCTGGGCTG GATTGAAACC GGCAGTTTTG CCCGCGTACC GCCGTCGCTG
CGCTTTTTTG CCGGGGGCGA TCGCAGCATT CGCGGCTACA AGTACAAATC CATCTCCCCC
AGGGACAGCG ACGGTAAGCT GACCGGCGCG TCAAAGCTGG CGGCCGGCTC GTTGGAATAC
CAATACAACG TCAGCGGTAA ATGGTGGGGC GCGGTATTTG TGGACAGCGG CGAGGCCGTC
AACGATATCC GCCGCAGCAA CATCAAAACC GGGGCGGGCG TCGGCCTGCG CTGGGCATCG
CCGGTCGGGC CCGTCAAGCT GGATATCGCC CGGCCGATCG GTGACGACGA CAAGCATGGG
TTGCAGTTTT ACATCGGGCT GGGGCCGGAA CTATGA
|
|---|
| Protein sequence | MINNRNKRRL CGMALSQTLI LCGVLITPPT MAASSNVRLQ LLGLSGDVQK NVRARLSTIS
PDEVNADSRF RARVDEAIRQ GLRAMGYYQP DIHFDFIPAE GRGRPVLKVT VDPGEPVTIA
GSSIAMRGEA QHDEDYLRLV AEHRPKVGAV LNHGAYDNFK SELNNLAMRK GYFDARFNKS
QLGVMQSTRQ AWWDIDYDSG PRYRFGKVTF RHAQIQEQYL QALLPFHEGD AYTTEQLGEL
NRRLSATGWF NSAVVSPDFE RSRQSKVLPL DAVLTPRTRN SVETGVGYAT DVGPRLKTVW
NKPWVNSYGH SFTNSLSLSA PEQQLDMSYK IPLLKSPLEQ YYLVQGGLKR EDLNDTQSDT
TSLNLARYWE LNSGWQRALN LHWTLDHFTQ ASVTNTTMLI YPGVSFNRTR QRGGLMPDWG
DTQRYSVDVS NTTWGSDLDF AIFQAQNVWI RTLEEKHRFV ARANLGWIET GSFARVPPSL
RFFAGGDRSI RGYKYKSISP RDSDGKLTGA SKLAAGSLEY QYNVSGKWWG AVFVDSGEAV
NDIRRSNIKT GAGVGLRWAS PVGPVKLDIA RPIGDDDKHG LQFYIGLGPE L
|
|---|
| |