| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd703_0775 |
|---|
| Symbol | |
|---|
| ID | 8088048 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dickeya dadantii Ech703 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012880 |
|---|
| Strand | - |
|---|
| Start bp | 881968 |
|---|
| End bp | 882693 |
|---|
| Gene Length | 726 bp |
|---|
| Protein Length | 241 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 644834847 |
|---|
| Product | alanine racemase domain protein |
|---|
| Protein accession | YP_002986408 |
|---|
| Protein GI | 242238227 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0325] Predicted enzyme with a TIM-barrel fold |
|---|
| TIGRFAM ID | [TIGR00044] pyridoxal phosphate enzyme, YggS family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.2038 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACTACAA GTACAGTCCC GCAAAACCTA CAGGACGTGC GGCAGAAAAT CTCGGCGGCG
GCGGAACGCT GCGGGCGCGC GCCAGAAGAA ATTACGCTGC TTGCCGTCAG CAAAACCAAA
CCTGTGACGG CGATCGAAGA TGCCATCGCC GCCGGCCAGC GTGCCTTTGG GGAAAATTAC
GTGCAGGAAG GCGTGGAAAA AATTCTGTAT TTCCGCCAGA CGCACCAGGA CATCGCGCTG
GAATGGCACT TTATCGGGCC GTTGCAGTCG AACAAAAGTC GTCCGGTGGC GGAGCACTTC
GACTGGTGCC ACACCATTGA CCGGCTGCGC ATCGCCCAGC GGTTGAGCGA GCAGCGCCCG
GATACACTGC CGCCGCTGAA TGTACTGTTG CAAATTAATA TCAGCCGGGA AGAGAGCAAA
TCCGGTATTC TGCCTGACGA GCTACCGGCG TTGGCCGCCA GCGTCGCCGC CCTGCCCAAC
CTGCGGCTGC GCGGTCTGAT GGCGATTCCG GCGCCGGAAG CGGATCACCA ACGGCAGTTG
GCGGTTTTCC GCCGCATGTA CGACCTTTTT CAGCAGTTGC AGGCTGACCA CGCGCATGTC
GACACCCTCT CCATGGGAAT GACCGACGAT ATGGCCGCCG CCATTGAGGC AGGCAGCACG
CTGGTACGCA TCGGCACCGC CATCTTCGGC GCGCGCGATT ACGGGGCAAC GGCCCGCAAC
GCTTGA
|
|---|
| Protein sequence | MTTSTVPQNL QDVRQKISAA AERCGRAPEE ITLLAVSKTK PVTAIEDAIA AGQRAFGENY
VQEGVEKILY FRQTHQDIAL EWHFIGPLQS NKSRPVAEHF DWCHTIDRLR IAQRLSEQRP
DTLPPLNVLL QINISREESK SGILPDELPA LAASVAALPN LRLRGLMAIP APEADHQRQL
AVFRRMYDLF QQLQADHAHV DTLSMGMTDD MAAAIEAGST LVRIGTAIFG ARDYGATARN
A
|
|---|
| |