Gene Dd703_0633 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDd703_0633 
Symbol 
ID8089040 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDickeya dadantii Ech703 
KingdomBacteria 
Replicon accessionNC_012880 
Strand
Start bp714624 
End bp716429 
Gene Length1806 bp 
Protein Length601 aa 
Translation table11 
GC content55% 
IMG OID644834705 
ProductAMP-dependent synthetase and ligase 
Protein accessionYP_002986266 
Protein GI242238085 
COG category[I] Lipid transport and metabolism 
COG ID[COG1022] Long-chain acyl-CoA synthetases (AMP-forming) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.178096 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTAAAC ATCCATTATC ACACTATCAT CTGGTTCAAC GTATTCAGCA TCAGGTCGCT 
GTTCGATCTG ATGCGCCGGC GTTTCGGGAA TGGGATCCCG AACGTGAACT GCATTTGGTC
TGGCGGCAGG TCGGAGAGCG AGTCAACCGT ATCGCCTGCG GATTGCTGGC ATTGGGGATC
GAAGTGCAGG AACGGGTGGC TATTTTCTCG GATAACGGGA TCAACTGGTC GCTGGCGGAT
CTGGCCTTGT TACATTTGCG GGCAATTACG GTGCCGCTGT ATGCCACCAG TTCGGTGGGG
CAGGCGGCAT TCATTCTCAA CGATGCGGAT ATTCGCACGG TTTTTGTCGG CGGGCAGGCG
CAGTTCGATA CCTTGATGTC GCTACGCGAG GCCTGTCCTC AACTTCGCCA TATCATTCTG
CTGGATGACA ATATTCGGCG TCGTGGATGC GATATTGCGG TGTATTTGCG GGAGTTTGAA
GCATCGGCGG ATGAGGCGGT TTGGCTGCCT GAGCTGCAAC GGCGTATTGA CGAACGCGAT
TTGAATGATC TGTTTACACT GATTTATACC TCAGGAACGA CCGGCGAGCC TAAAGGCGTG
ATGCTGGATT ACGCCAACAT GGCGACTCAA CTTAAGCTGC ATGATGAACG GCTTGACGTC
TCTGACCAGG ATGTTTCCCT GTGCTTTTTG CCGTTGTCCC ACGTATTTGA ACGGGCATGG
AGTTTTTTCA TCATGCACTG TGGTGCGCTG AATGTGTACC TGAGCGATAC CAATCAGGTT
CGGGCCACCA TGGAAGCGGT GTCGCCGACG TTGATGTGTG CGGTGCCGCG CTTTTACGAA
AAGGTGTACT GCGGTATTCA CGAGAAAGTG GCGCAGGCGC CGTGGCATCG TCGCCTGCTG
TTCCGCTGGG CGCTGGAACG AGGGCGTCAT CTGCATGCCC GCCGGCAAGC CGGTAGACGT
GTCGGCTTCT GGGGCCGCGC CGCGCATAGA ATCGCCGACC GGCTGGTATT GCAGCGCCTG
CGGCAATTGC TCGGTGGTCG GGTTCGCTTC CTGCCAGCGG CGGGCGCTCG TCTTGACGGT
AATATCATCG CCTTTTTTCA GTCGATAGGC GTCCGCATCG TTTACGGATA TGGCCTGACG
GAAACCTGCG CGACGGTATC CTGCTGGGAG CATGAGGCGA TCTCTCTGAT GTCGGTGGGG
ACGCCGTTGC CCGGTATCGA GGTTCGTATC GGCGAGGAGA GTGAAATTCA GGTGCGGGGC
GCTACGGTGA TGCGCGGCTA TTTTCATCGT CCGGAAGAGA CCGCCGCAGC CTTTACGCCA
GATGGCTGGT TTAAAACGGG TGATGCAGGC GAACTGGACG AACGGGGAAA TCTGTTTATT
ACCGAACGCA TCAAGGATCT GATGAAGACC TCCGGCGGAA AATATATTGC CCCTCAATGT
CTGGAAGGCA CCTTGGGGCA AGATCGCTAT ATCGAGCAGG TGGCGGTGAT TGCGGATGCG
CGCAAATATG TCTCGGCCCT GATTGTGCCG TGTTTCGAGG CTTTAGAGGA GTACGCCCGC
TCCATCAATC TTCGCTATCA GGATCGGTTG GATCTCTTGC GCCACAATCA TATTTTGGAA
TTGTTTGAAC AACGTTTGCA GGAGATGCAG AAGGAGTTCG CACGTTTCGA ACAAGTGAAG
AAATTTACCC TTCTGCCCGC GCCGTTTAGC ATGGAAGACG GCGAACTGAC GCCGACATTA
AAACTGCGTC GTAAAGTCAT CCATCAGCGT TATCAGCCTG AAATCGACGC AATGTACGCG
GAGTGA
 
Protein sequence
MSKHPLSHYH LVQRIQHQVA VRSDAPAFRE WDPERELHLV WRQVGERVNR IACGLLALGI 
EVQERVAIFS DNGINWSLAD LALLHLRAIT VPLYATSSVG QAAFILNDAD IRTVFVGGQA
QFDTLMSLRE ACPQLRHIIL LDDNIRRRGC DIAVYLREFE ASADEAVWLP ELQRRIDERD
LNDLFTLIYT SGTTGEPKGV MLDYANMATQ LKLHDERLDV SDQDVSLCFL PLSHVFERAW
SFFIMHCGAL NVYLSDTNQV RATMEAVSPT LMCAVPRFYE KVYCGIHEKV AQAPWHRRLL
FRWALERGRH LHARRQAGRR VGFWGRAAHR IADRLVLQRL RQLLGGRVRF LPAAGARLDG
NIIAFFQSIG VRIVYGYGLT ETCATVSCWE HEAISLMSVG TPLPGIEVRI GEESEIQVRG
ATVMRGYFHR PEETAAAFTP DGWFKTGDAG ELDERGNLFI TERIKDLMKT SGGKYIAPQC
LEGTLGQDRY IEQVAVIADA RKYVSALIVP CFEALEEYAR SINLRYQDRL DLLRHNHILE
LFEQRLQEMQ KEFARFEQVK KFTLLPAPFS MEDGELTPTL KLRRKVIHQR YQPEIDAMYA
E